• using R Under development (unstable) (2013-04-22 r62639)
  • using platform: x86_64-unknown-linux-gnu (64-bit)
  • using session charset: UTF-8
  • checking for file ‘RcmdrPlugin.EBM/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘RcmdrPlugin.EBM’ version ‘1.0-2’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘RcmdrPlugin.EBM’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    enterTableEBMCrossTab: no visible binding for global variable ‘top’
    enterTableEBMCrossTab : onOK: no visible binding for global variable
    ‘chisqTestVariable’
    enterTableEBMCrossTab : onOK: no visible binding for global variable
    ‘chisqComponentsVariable’
    enterTableEBMCrossTab : onOK: no visible binding for global variable
    ‘expFreqVariable’
    enterTableEBMCrossTab : onOK: no visible binding for global variable
    ‘fisherTestVariable’
    enterTableEBMCrossTab : onOK: no visible binding for global variable
    ‘indicatorsVariable’
    enterTableEBMCrossTab : onOK: no visible binding for global variable
    ‘percentsVariable’
    enterTableEBMCrossTab: no visible binding for global variable
    ‘percentsFrame’
    enterTableEBMCrossTab: no visible binding for global variable
    ‘testsFrame’
    enterTableEBMCrossTab: no visible binding for global variable
    ‘indicatorsFrame’
    enterTableEBMCrossTab: no visible binding for global variable
    ‘buttonsFrame’
    fncEBMCrossTab: no visible binding for '<<-' assignment to
    ‘.TableOriginal’
    fncEBMCrossTab: no visible binding for '<<-' assignment to ‘decimals’
    fncEBMCrossTab: no visible binding for global variable ‘.Test’
    fncEBMCrossTab: no visible binding for global variable ‘.TableOriginal’
    fncEBMCrossTabWin: no visible binding for global variable ‘top’
    fncEBMCrossTabWin : onOK: no visible binding for global variable
    ‘percentsVariable’
    fncEBMCrossTabWin : onOK: no visible binding for global variable
    ‘chisqTestVariable’
    fncEBMCrossTabWin : onOK: no visible binding for global variable
    ‘chisqComponentsVariable’
    fncEBMCrossTabWin : onOK: no visible binding for global variable
    ‘expFreqVariable’
    fncEBMCrossTabWin : onOK: no visible binding for global variable
    ‘fisherTestVariable’
    fncEBMCrossTabWin : onOK: no visible binding for global variable
    ‘indicatorsVariable’
    fncEBMCrossTabWin : onOK: no visible binding for global variable
    ‘fncFastTestT’
    fncEBMCrossTabWin : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncEBMCrossTabWin: no visible binding for global variable
    ‘percentsFrame’
    fncEBMCrossTabWin: no visible binding for global variable ‘testsFrame’
    fncEBMCrossTabWin: no visible binding for global variable
    ‘indicatorsFrame’
    fncEBMCrossTabWin: no visible binding for global variable ‘subsetFrame’
    fncEBMCrossTabWin: no visible binding for global variable
    ‘buttonsFrame’
    fncEBMDiagnosis: no visible binding for global variable ‘top’
    fncEBMDiagnosis : onOK: no visible binding for global variable
    ‘percentsVariable’
    fncEBMDiagnosis : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncEBMDiagnosis: no visible binding for global variable ‘percentsFrame’
    fncEBMDiagnosis: no visible binding for global variable ‘subsetFrame’
    fncEBMDiagnosis: no visible binding for global variable ‘buttonsFrame’
    fncEBMPostTestWin: no visible binding for global variable ‘top’
    fncEBMPostTestWin: no visible binding for global variable
    ‘buttonsFrame’
    fncEBMPrognosis: no visible binding for global variable ‘top’
    fncEBMPrognosis : onOK: no visible binding for global variable
    ‘percentsVariable’
    fncEBMPrognosis : onOK: no visible binding for global variable
    ‘chisqTestVariable’
    fncEBMPrognosis : onOK: no visible binding for global variable
    ‘chisqComponentsVariable’
    fncEBMPrognosis : onOK: no visible binding for global variable
    ‘expFreqVariable’
    fncEBMPrognosis : onOK: no visible binding for global variable
    ‘fisherTestVariable’
    fncEBMPrognosis : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncEBMPrognosis: no visible binding for global variable ‘percentsFrame’
    fncEBMPrognosis: no visible binding for global variable ‘testsFrame’
    fncEBMPrognosis: no visible binding for global variable ‘subsetFrame’
    fncEBMPrognosis: no visible binding for global variable ‘buttonsFrame’
    fncEBMTherapy: no visible binding for global variable ‘top’
    fncEBMTherapy : onOK: no visible binding for global variable
    ‘percentsVariable’
    fncEBMTherapy : onOK: no visible binding for global variable
    ‘chisqTestVariable’
    fncEBMTherapy : onOK: no visible binding for global variable
    ‘chisqComponentsVariable’
    fncEBMTherapy : onOK: no visible binding for global variable
    ‘expFreqVariable’
    fncEBMTherapy : onOK: no visible binding for global variable
    ‘fisherTestVariable’
    fncEBMTherapy : onOK: no visible binding for global variable
    ‘subsetVariable’
    fncEBMTherapy: no visible binding for global variable ‘percentsFrame’
    fncEBMTherapy: no visible binding for global variable ‘testsFrame’
    fncEBMTherapy: no visible binding for global variable ‘subsetFrame’
    fncEBMTherapy: no visible binding for global variable ‘buttonsFrame’
    fncGetConfIntText: no visible binding for global variable ‘decimals’

    Found the following assignments to the global environment:
    File ‘RcmdrPlugin.EBM/R/CrossTab.R’:
    assign(".Test", justDoIt(command), envir = .GlobalEnv)
    assign(".TheTable", justDoIt(command), envir = .GlobalEnv)
    assign(".TheTable", justDoIt(command), envir = .GlobalEnv)
    assign(".TheTable", justDoIt(command), envir = .GlobalEnv)
    assign(".Table", justDoIt(command), envir = .GlobalEnv)
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking examples ... NONE
  • checking PDF version of manual ... OK
    NOTE: There was 1 note.
    See
    ‘/data/blackswan/ripley/R/packages/tests-devel/RcmdrPlugin.EBM.Rcheck/00check.log’
    for details.