• using R Under development (unstable) (2013-04-22 r62639)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘GeoXp/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘GeoXp’ version ‘1.6.1’
• package encoding: latin1
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘GeoXp’ can be installed ... [13s/14s] OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  Found the following assignments to the global environment:
  File ‘GeoXp/R/angleplotmap.R’:
  assign("last.select", which(obs, arr.ind = TRUE), envir = .GlobalEnv)
  File ‘GeoXp/R/barmap.R’:
  assign("last.select", which(obs), envir = .GlobalEnv)
  File ‘GeoXp/R/boxplotmap.R’:
  assign("last.select", which(obs), envir = .GlobalEnv)
  File ‘GeoXp/R/clustermap.R’:
  assign("last.select", res, envir = .GlobalEnv)
  File ‘GeoXp/R/dbledensitymap.R’:
  assign("last.select", which(obs), envir = .GlobalEnv)
  File ‘GeoXp/R/dblehistomap.R’:
  assign("last.select", which(obs), envir = .GlobalEnv)
  File ‘GeoXp/R/densitymap.R’:
  assign("last.select", which(obs), envir = .GlobalEnv)
  File ‘GeoXp/R/driftmap.R’:
  assign("last.select", which(obs), envir = .GlobalEnv)
  File ‘GeoXp/R/ginimap.R’:
  assign("last.select", which(obs), envir = .GlobalEnv)
  File ‘GeoXp/R/histobarmap.R’:
  assign("last.select", which(obs), envir = .GlobalEnv)
  File ‘GeoXp/R/histomap.R’:
  assign("last.select", which(obs), envir = .GlobalEnv)
  File ‘GeoXp/R/misolationmap.r’:
  assign("last.select", which(obs, arr.ind = TRUE), envir = .GlobalEnv)
  File ‘GeoXp/R/moranplotmap.R’:
  assign("last.select", res, envir = .GlobalEnv)
  File ‘GeoXp/R/mvariocloudmap.r’:
  assign("last.select", which(obs, arr.ind = TRUE), envir = .GlobalEnv)
  File ‘GeoXp/R/neighbourmap.R’:
  assign("last.select", res, envir = .GlobalEnv)
  File ‘GeoXp/R/pcamap.R’:
  assign("last.select", res, envir = .GlobalEnv)
  File ‘GeoXp/R/plot3dmap.r’:
  assign("last.select", which(obs), envir = .GlobalEnv)
  File ‘GeoXp/R/polyboxplotmap.R’:
  assign("last.select", which(obs), envir = .GlobalEnv)
  File ‘GeoXp/R/scattermap.R’:
  assign("last.select", which(obs), envir = .GlobalEnv)
  File ‘GeoXp/R/variocloudmap.R’:
  assign("last.select", which(obs, arr.ind = TRUE), envir = .GlobalEnv)
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... [22s/23s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... OK
• checking re-building of vignette PDFs ... [8s/10s] OK
• checking PDF version of manual ... OK
  NOTE: There was 1 note.
  See
  ‘/data/blackswan/ripley/R/packages/tests-devel/GeoXp.Rcheck/00check.log’
  for details.