• using R Under development (unstable) (2013-04-22 r62639)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘EnQuireR/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘EnQuireR’ version ‘0.10’
• package encoding: latin1
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘EnQuireR’ can be installed ... OK
• checking installed package size ... NOTE
  installed size is 6.2Mb
  sub-directories of 1Mb or more:
  Sweave 6.0Mb
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  ENMCA : fn: possible error in savePlot(filename = "Clustplot", type =
  "pdf", device = dev.cur(), restoreConsole = TRUE): unused argument
  (restoreConsole = TRUE)
  ENMCA : fn: possible error in savePlot(filename = "MCAplotindclasse",
  type = "pdf", device = dev.cur(), restoreConsole = TRUE): unused
  argument (restoreConsole = TRUE)
  ENMCA : fn: possible error in savePlot(filename = "MCAplotvar", type =
  "pdf", device = dev.cur(), restoreConsole = TRUE): unused argument
  (restoreConsole = TRUE)
  ENMCA : fn: possible error in savePlot(filename = "MCAplotind", type =
  "pdf", device = dev.cur(), restoreConsole = TRUE): unused argument
  (restoreConsole = TRUE)
  ENMCA : fn: possible error in savePlot(filename = "MCAplotquantisup",
  type = "pdf", device = dev.cur(), restoreConsole = TRUE): unused
  argument (restoreConsole = TRUE)
  ENMCA : fn: possible error in savePlot(filename = "Ellipse", type =
  "pdf", device = dev.cur(), restoreConsole = TRUE): unused argument
  (restoreConsole = TRUE)
  ENMCA : fn: possible error in savePlot(filename = "Lisib", type =
  "pdf", device = dev.cur(), restoreConsole = TRUE): unused argument
  (restoreConsole = TRUE)
  ENMCA : fn: possible error in savePlot(filename = "Density", type =
  "pdf", device = dev.cur(), restoreConsole = TRUE): unused argument
  (restoreConsole = TRUE)
  ENMCA : fn: possible error in savePlot(filename = "Densitypop", type =
  "pdf", device = dev.cur(), restoreConsole = TRUE): unused argument
  (restoreConsole = TRUE)
  ENMCA : fn: possible error in savePlot(filename = "barplotgr", type =
  "pdf", device = dev.cur(), restoreConsole = TRUE): unused argument
  (restoreConsole = TRUE)
  ENMCA : fn: possible error in savePlot(filename = paste("barvarclus",
  i, sep = ""), type = "pdf", device = dev.cur(), restoreConsole =
  TRUE): unused argument (restoreConsole = TRUE)
  XvsYbarplot: possible error in hsv(h = 1, s = 1, v = 1, 1, 1): unused
  argument (1)
  XvsYbarplot: possible error in hsv(h = 1, s = 0.4 + (height[i]/max) *
  0.6, v = 1, 1, 1): unused argument (1)
  XvsYbarplot: possible error in hsv(h = a * i, s = 1, v = 1, 1, 1):
  unused argument (1)
  barplot_function: possible error in hsv(h = a * m, s = 1, v = 1, 1, 1):
  unused argument (1)
  barplot_function: possible error in hsv(h = a * m, s = 0.4 +
  (cont[j]/max) * 0.6, v = 1, 1, 1): unused argument (1)
  barplot_sweave : set.X: no visible binding for global variable ‘X’
  col.barplot: possible error in hsv(h = 1, s = 1, v = 1, 1, 1): unused
  argument (1)
  col.barplot: possible error in hsv(h = 1, s = 0.4 + (height[i]/max) *
  0.6, v = 1, 1, 1): unused argument (1)
  col.barplot: possible error in hsv(h = a * i, s = 1, v = 1, 1, 1):
  unused argument (1)
  
  Found the following assignments to the global environment:
  File ‘EnQuireR/R/ENMCA.R’:
  assign("hclus", tab2, envir = .GlobalEnv)
  assign("num.var", num.var, envir = .GlobalEnv)
  assign("catdes", aa, envir = .GlobalEnv)
  assign("res.acm", bb, envir = .GlobalEnv)
  assign("dataset", cc, envir = .GlobalEnv)
  assign("dataset2", dd, envir = .GlobalEnv)
  assign("res.acm.tot", res$MCA, envir = .GlobalEnv)
  assign("res.signif", res.signif$resum, envir = .GlobalEnv)
  File ‘EnQuireR/R/ENbarplot.R’:
  assign("X", X, envir = .GlobalEnv)
  assign("dataset", dataset, envir = .GlobalEnv)
  File ‘EnQuireR/R/chisq.desc.R’:
  assign("Y", Y, envir = .GlobalEnv)
  assign("X", X, envir = .GlobalEnv)
  File ‘EnQuireR/R/chisq.sweave.R’:
  assign("language", language, envir = .GlobalEnv)
  assign("varY", var, envir = .GlobalEnv)
  assign("varX", desc, envir = .GlobalEnv)
  assign("dataset", dataset, envir = .GlobalEnv)
  assign("X", c, envir = .GlobalEnv)
  assign("Y", d, envir = .GlobalEnv)
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... OK
• checking PDF version of manual ... OK
  NOTE: There were 2 notes.
  See
  ‘/data/blackswan/ripley/R/packages/tests-devel/EnQuireR.Rcheck/00check.log’
  for details.