• using R Under development (unstable) (2013-04-22 r62639)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘Deducer/DESCRIPTION’ ... OK
• this is package ‘Deducer’ version ‘0.7-6’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘Deducer’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  File ‘Deducer/R/zzz.R’:
  .onLoad calls:
  packageStartupMessage("\nNote: Problem initiating rJava. The Java GUI will not be available.\n")
  packageStartupMessage("\nLoading Deducer without GUI. If you wish the GUI to load, run options(DeducerNoGUI=FALSE) before loading Deducer\n")
  packageStartupMessage("\nNOTE: Environmental variable NOAWT set. Loading Deducer without GUI.\n")
  packageStartupMessage("\nNote: Problem initiating JRI. The Java GUI will not be available.\n")
  packageStartupMessage("\nNote: Problem initiating JRI. Make sure you built R with shared libraries The Java GUI will not be available.\n")
  packageStartupMessage("Note: Unable to start Deducer's Java class. The Java GUI will not be available.")
  packageStartupMessage("\n\nDeducer has been loaded from within the Windows Rgui. \n\t\t\t\tFor the best experience, you are encouraged to use JGR console which can be\n\t\t\t\tdownloaded from: http://jgr.markushelbig.org/\n")
  packageStartupMessage("\n\nNote Non-JGR console detected:\n\tDeducer is best used from within JGR (http://jgr.markushelbig.org/).\n\t\t\t\t\t\t\tTo Bring up GUI dialogs, type deducer().\n")
  
  See section ‘Good practice’ in '?.onAttach'.
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [15s/16s] OK
• checking PDF version of manual ... OK
  NOTE: There was 1 note.
  See
  ‘/data/blackswan/ripley/R/packages/tests-devel/Deducer.Rcheck/00check.log’
  for details.