* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/suddengains.Rcheck’ * using R Under development (unstable) (2024-04-05 r86344) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-13 (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘suddengains/DESCRIPTION’ ... OK * this is package ‘suddengains’ version ‘0.7.2’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘suddengains’ can be installed ... [11s/17s] OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/suddengains-00install.html' for details. * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE Namespace in Imports field not imported from: ‘cli’ All declared Imports should be used. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [16s/21s] OK * checking Rd files ... NOTE checkRd: (-1) count_intervals.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) count_intervals.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) count_intervals.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) count_intervals.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) describe_sg.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) describe_sg.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) describe_sg.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) describe_sg.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) describe_sg.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) describe_sg.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) describe_sg.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) describe_sg.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) describe_sg.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) describe_sg.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) sgdata.Rd:10: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:11: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:12: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:13: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:14: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:15: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:16: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:17: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:18: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:19: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:20: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:21: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:22: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:23: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:24: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:26: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:27: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:28: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:29: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:30: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:31: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:32: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:33: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:34: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:35: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:36: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:37: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:38: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:39: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata.Rd:40: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:10: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:11: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:12: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:13: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:14: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:15: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:16: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:17: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:18: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:19: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:20: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:21: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:22: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:23: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:24: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:26: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:27: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:28: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:29: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:30: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:31: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:32: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:33: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:34: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:35: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:36: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:37: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:38: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:39: Lost braces in \itemize; meant \describe ? checkRd: (-1) sgdata_bad.Rd:40: Lost braces in \itemize; meant \describe ? * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [39s/51s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [56s/73s] OK * checking PDF version of manual ... [8s/13s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 NOTEs