* installing *source* package ‘rlemon’ ... ** package ‘rlemon’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rlemon/src' g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RInterfaces.cpp -o RInterfaces.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c base.cpp -o base.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c random.cpp -o random.o In file included from /usr/local/gcc13/include/c++/13.2.0/x86_64-pc-linux-gnu/bits/c++allocator.h:33, from /usr/local/gcc13/include/c++/13.2.0/bits/allocator.h:46, from /usr/local/gcc13/include/c++/13.2.0/bits/alloc_traits.h:39, from /usr/local/gcc13/include/c++/13.2.0/ext/alloc_traits.h:34, from /usr/local/gcc13/include/c++/13.2.0/bits/hashtable_policy.h:39, from /usr/local/gcc13/include/c++/13.2.0/bits/hashtable.h:35, from /usr/local/gcc13/include/c++/13.2.0/bits/unordered_map.h:33, from /usr/local/gcc13/include/c++/13.2.0/unordered_map:41, from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:153, from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:62, from /data/gannet/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30, from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp.h:27, from approximation.h:1, from RInterfaces.cpp:1: In member function 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = lemon::SmartEdgeSetBase::ArcT; _Args = {lemon::SmartEdgeSetBase::ArcT}; _Tp = lemon::SmartEdgeSetBase::ArcT]', inlined from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = lemon::SmartEdgeSetBase::ArcT; _Args = {lemon::SmartEdgeSetBase::ArcT}; _Tp = lemon::SmartEdgeSetBase::ArcT]' at /usr/local/gcc13/include/c++/13.2.0/bits/alloc_traits.h:537:17, inlined from 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {lemon::SmartEdgeSetBase::ArcT}; _Tp = lemon::SmartEdgeSetBase::ArcT; _Alloc = std::allocator::ArcT>]' at /usr/local/gcc13/include/c++/13.2.0/bits/vector.tcc:117:30, inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = lemon::SmartEdgeSetBase::ArcT; _Alloc = std::allocator::ArcT>]' at /usr/local/gcc13/include/c++/13.2.0/bits/stl_vector.h:1296:21, inlined from 'lemon::SmartEdgeSetBase::Edge lemon::SmartEdgeSetBase::addEdge(const Node&, const Node&) [with GR = lemon::ListGraph]' at ../inst/lemon/edge_set.h:1144:21, inlined from 'lemon::EdgeSetExtender::Edge lemon::EdgeSetExtender::addEdge(const Node&, const Node&) [with Base = lemon::SmartEdgeSetBase]' at ../inst/lemon/bits/edge_set_extender.h:588:34: /usr/local/gcc13/include/c++/13.2.0/bits/new_allocator.h:187:11: warning: '' may be used uninitialized [-Wmaybe-uninitialized] 187 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ../inst/lemon/planarity.h:36, from planarity_embedding.h:1, from RInterfaces.cpp:11: ../inst/lemon/edge_set.h: In member function 'lemon::EdgeSetExtender::Edge lemon::EdgeSetExtender::addEdge(const Node&, const Node&) [with Base = lemon::SmartEdgeSetBase]': ../inst/lemon/edge_set.h:1144:22: note: '' declared here 1144 | arcs.push_back(ArcT()); | ^~~~~~ In member function 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = lemon::SmartEdgeSetBase::ArcT; _Args = {lemon::SmartEdgeSetBase::ArcT}; _Tp = lemon::SmartEdgeSetBase::ArcT]', inlined from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = lemon::SmartEdgeSetBase::ArcT; _Args = {lemon::SmartEdgeSetBase::ArcT}; _Tp = lemon::SmartEdgeSetBase::ArcT]' at /usr/local/gcc13/include/c++/13.2.0/bits/alloc_traits.h:537:17, inlined from 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {lemon::SmartEdgeSetBase::ArcT}; _Tp = lemon::SmartEdgeSetBase::ArcT; _Alloc = std::allocator::ArcT>]' at /usr/local/gcc13/include/c++/13.2.0/bits/vector.tcc:117:30, inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = lemon::SmartEdgeSetBase::ArcT; _Alloc = std::allocator::ArcT>]' at /usr/local/gcc13/include/c++/13.2.0/bits/stl_vector.h:1296:21, inlined from 'lemon::SmartEdgeSetBase::Edge lemon::SmartEdgeSetBase::addEdge(const Node&, const Node&) [with GR = lemon::ListGraph]' at ../inst/lemon/edge_set.h:1145:21, inlined from 'lemon::EdgeSetExtender::Edge lemon::EdgeSetExtender::addEdge(const Node&, const Node&) [with Base = lemon::SmartEdgeSetBase]' at ../inst/lemon/bits/edge_set_extender.h:588:34: /usr/local/gcc13/include/c++/13.2.0/bits/new_allocator.h:187:11: warning: '' may be used uninitialized [-Wmaybe-uninitialized] 187 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../inst/lemon/edge_set.h: In member function 'lemon::EdgeSetExtender::Edge lemon::EdgeSetExtender::addEdge(const Node&, const Node&) [with Base = lemon::SmartEdgeSetBase]': ../inst/lemon/edge_set.h:1145:22: note: '' declared here 1145 | arcs.push_back(ArcT()); | ^~~~~~ g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o rlemon.so RInterfaces.o RcppExports.o base.o random.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rlemon/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rlemon/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rlemon/src' installing to /data/gannet/ripley/R/packages/tests-devel/rlemon.Rcheck/00LOCK-rlemon/00new/rlemon/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rlemon)