* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/recapr.Rcheck’ * using R Under development (unstable) (2024-04-05 r86344) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-13 (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘recapr/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘recapr’ version ‘0.4.4’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘recapr’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/recapr-00install.html' for details. * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [10s/14s] OK * checking Rd files ... NOTE checkRd: (-1) cistrat.Rd:65: Lost braces 65 | \\link{strattest}, \link{Nstrat}, \link{rstrat}, \link{vstrat}, \link{sestrat}, | ^ checkRd: (-1) consistencytest.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) consistencytest.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) consistencytest.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) consistencytest.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) consistencytest.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) consistencytest.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) consistencytest.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) consistencytest.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) consistencytest.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) consistencytest.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) consistencytest.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) consistencytest.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:33-34: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:34-35: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:35-36: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:36-37: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:37-38: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:38-39: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:39-40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:41-42: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:42-43: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:43-44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:44-45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:46-47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:47-48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powconsistencytest.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powstrattest.Rd:29-31: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powstrattest.Rd:31-32: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powstrattest.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powstrattest.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) powstrattest.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) strattest.Rd:23-24: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) strattest.Rd:24-25: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) strattest.Rd:25-26: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) strattest.Rd:26-27: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) strattest.Rd:27-28: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) strattest.Rd:28-29: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) strattest.Rd:29-30: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) strattest.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) strattest.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) strattest.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) strattest.Rd:34-35: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) strattest.Rd:35-36: Lost braces in \itemize; \value handles \item{}{} directly * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [19s/22s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [27s/34s] OK Running ‘testthat.R’ [27s/34s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [38s/47s] OK * checking PDF version of manual ... [12s/19s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 NOTE