* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/qbld.Rcheck’
* using R Under development (unstable) (2024-04-05 r86344)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc-13 (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘qbld/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘qbld’ version ‘1.0.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘qbld’ can be installed ... [315s/112s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/qbld-00install.html' for details.
* used C++ compiler: ‘g++-13 (GCC) 13.2.0’
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) aldmix.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) aldmix.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) aldmix.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) aldmix.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gig.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) gig.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) model.qbld.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) model.qbld.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) model.qbld.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) model.qbld.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) model.qbld.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) model.qbld.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) qbld-package.Rd:24: Lost braces; missing escapes or markup?
    24 | \item \code{\link{model.qbld}} {: Runs the QBLD sampler as in Rahman and Vossmeyer(2019) and outputs a `qbld' class object.}
       |                                ^
checkRd: (-1) qbld-package.Rd:25: Lost braces; missing escapes or markup?
    25 | \item \code{\link{summary.qbld}} {: S3 method that summarizes the outputs of the model.qbld function.}
       |                                  ^
checkRd: (-1) qbld-package.Rd:26: Lost braces; missing escapes or markup?
    26 | \item \code{\link{plot.qbld}} {: S3 method that plots `qbld' class object. }
       |                               ^
checkRd: (-1) qbld-package.Rd:27: Lost braces; missing escapes or markup?
    27 | \item \code{\link{aldmix}} {: Cumulative density, probability distribution function, quantile function and random generation for the asymmetric Laplace distribution.}
       |                            ^
checkRd: (-1) qbld-package.Rd:28: Lost braces; missing escapes or markup?
    28 | \item \code{\link{gig}} {: Probability distribution function, random generation for the generalised inverse Gaussian.}
       |                         ^
checkRd: (-1) qbld-package.Rd:29: Lost braces; missing escapes or markup?
    29 | \item \code{\link{airpollution}}, \code{\link{locust}} {: In-built datasets} 
       |                                                        ^
checkRd: (-1) summary.qbld.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.qbld.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.qbld.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.qbld.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.qbld.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.qbld.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.qbld.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.qbld.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [24s/33s] OK
* checking PDF version of manual ... [7s/12s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE