* installing *source* package ‘pln’ ...
** package ‘pln’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/pln/src'
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c amatrix.c -o amatrix.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c bcplncov.c -o bcplncov.o
bcplncov.c: In function 'Rbclcov':
bcplncov.c:445:33: warning: variable 'm2' set but not used [-Wunused-but-set-variable]
445 | int ip,jp,j1,j2,k1,k2,iv,r,ic,m2,ijk,ic1,ic2;
| ^~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c cmata.c -o cmata.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c d2v.c -o d2v.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c geppldet.c -o geppldet.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c m2.c -o m2.o
m2.c: In function 'Rm2':
m2.c:485:14: warning: variable 'x2' set but not used [-Wunused-but-set-variable]
485 | double m2,x2,n2;
| ^~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c m2rasch.c -o m2rasch.o
m2rasch.c: In function 'rpghder':
m2rasch.c:362:19: warning: variable 'np1' set but not used [-Wunused-but-set-variable]
362 | int i,j,k,np,id,np1;
| ^~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c nrbcpln.c -o nrbcpln.o
nrbcpln.c: In function 'plnbclk':
nrbcpln.c:251:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
251 | for(ip=0;ip<np;ip++) Rprintf("%f ", dd[ip][np]); Rprintf("\n");
| ^~~
nrbcpln.c:251:54: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
251 | for(ip=0;ip<np;ip++) Rprintf("%f ", dd[ip][np]); Rprintf("\n");
| ^~~~~~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c nrmin.c -o nrmin.o
nrmin.c: In function 'nrmin':
nrmin.c:91:7: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
91 | for(j=0;j<np;j++) Rprintf("%f ", val[j]); Rprintf("\n");
| ^~~
nrmin.c:91:49: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
91 | for(j=0;j<np;j++) Rprintf("%f ", val[j]); Rprintf("\n");
| ^~~~~~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c nrminbcl.c -o nrminbcl.o
nrminbcl.c: In function 'nrminbcl':
nrminbcl.c:94:7: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
94 | for(j=0;j<np;j++) Rprintf("%f ", val[j]); Rprintf("\n");
| ^~~
nrminbcl.c:94:49: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
94 | for(j=0;j<np;j++) Rprintf("%f ", val[j]); Rprintf("\n");
| ^~~~~~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c nrmlepln.c -o nrmlepln.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c nrmlerasch.c -o nrmlerasch.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c pln_init.c -o pln_init.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c polyder2.c -o polyder2.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c simulpln.c -o simulpln.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c ssgauher.c -o ssgauher.o
ssgauher.c: In function 'gauher':
ssgauher.c:53:7: warning: variable 'n1' set but not used [-Wunused-but-set-variable]
53 | int n1,i,n2,ni;
| ^~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c startpln.c -o startpln.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DR -DALL -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c x2statb.c -o x2statb.o
gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o pln.so amatrix.o bcplncov.o cmata.o d2v.o geppldet.o m2.o m2rasch.o nrbcpln.o nrmin.o nrminbcl.o nrmlepln.o nrmlerasch.o pln_init.o polyder2.o simulpln.o ssgauher.o startpln.o x2statb.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/pln/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/pln/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/pln/src'
installing to /data/gannet/ripley/R/packages/tests-devel/pln.Rcheck/00LOCK-pln/00new/pln/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (pln)