* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/pedbp.Rcheck’ * using R Under development (unstable) (2024-04-23 r86473) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-13 (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘pedbp/DESCRIPTION’ ... OK * this is package ‘pedbp’ version ‘2.0.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘pedbp’ can be installed ... [10m/11m] OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/pedbp-00install.html' for details. * used C++ compiler: ‘g++-13 (GCC) 13.2.0’ * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [11s/11s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [134s/135s] OK Running ‘test-bmi_for_age.R’ [18s/18s] Running ‘test-bp-by-source.R’ Running ‘test-bp_cdf.R’ Running ‘test-bp_chart.R’ Running ‘test-bp_distributions.R’ [34s/34s] Running ‘test-bp_parameters.R’ Running ‘test-cppBP.R’ Running ‘test-cppPGSF.R’ [23s/23s] Running ‘test-est_norm.R’ Running ‘test-gemelli1990.R’ Running ‘test-gs_chart.R’ Running ‘test-head_circumference_for_age.R’ [13s/13s] Running ‘test-height_for_age.R’ Running ‘test-internal-data.R’ Running ‘test-length_for_age.R’ [13s/13s] Running ‘test-lms.R’ Running ‘test-lo2013.R’ Running ‘test-nhlbi_bp_norms.R’ Running ‘test-weight_for_age.R’ [16s/16s] Running ‘test-weight_for_height.R’ Running ‘test-weight_for_length.R’ * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [17s/17s] OK * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: OK