* installing *source* package ‘mvnfast’ ...
** package ‘mvnfast’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/mvnfast/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c dmixtCpp.cpp -o dmixtCpp.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c dmvtCpp.cpp -o dmvtCpp.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c init.c -o init.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c mahaCpp.cpp -o mahaCpp.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c msCpp.cpp -o msCpp.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rmixnCpp.cpp -o rmixnCpp.o
In file included from mvnfast.h:9,
                 from dmixtCpp.cpp:20:
sitmo/sitmo.hpp: In member function 'void sitmo::prng_engine::discard(uint64_t)':
sitmo/sitmo.hpp:224:9: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  224 |   if (z < 8 - _o_counter) {
      |       ~~^~~~~~~~~~~~~~~~
dmixtCpp.cpp: In function 'SEXPREC* dmixtCpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
dmixtCpp.cpp:65:18: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
   65 |     if( A.nrow() != n ) Rcpp::stop("A.nrow() != n");
      |         ~~~~~~~~~^~~~
dmixtCpp.cpp:66:18: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
   66 |     if( A.ncol() != m ) Rcpp::stop("A.ncol() != m");
      |         ~~~~~~~~~^~~~
dmixtCpp.cpp:83:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
   83 |     for(int ii = 0; ii < m; ii++)
      |                     ~~~^~~
dmixtCpp.cpp:100:27: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
  100 |     for(int imix = 0; imix<m; imix++)
      |                       ~~~~^~
dmixtCpp.cpp:108:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
  108 |     for(int ii = 0; ii<n; ii++)
      |                     ~~^~
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rmixtCpp.cpp -o rmixtCpp.o
In file included from mvnfast.h:9,
                 from dmvtCpp.cpp:20:
sitmo/sitmo.hpp: In member function 'void sitmo::prng_engine::discard(uint64_t)':
sitmo/sitmo.hpp:224:9: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  224 |   if (z < 8 - _o_counter) {
      |       ~~^~~~~~~~~~~~~~~~
In file included from mvnfast.h:9,
                 from mahaCpp.cpp:20:
sitmo/sitmo.hpp: In member function 'void sitmo::prng_engine::discard(uint64_t)':
sitmo/sitmo.hpp:224:9: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  224 |   if (z < 8 - _o_counter) {
      |       ~~^~~~~~~~~~~~~~~~
In file included from mvnfast.h:9,
                 from msCpp.cpp:21:
sitmo/sitmo.hpp: In member function 'void sitmo::prng_engine::discard(uint64_t)':
sitmo/sitmo.hpp:224:9: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  224 |   if (z < 8 - _o_counter) {
      |       ~~^~~~~~~~~~~~~~~~
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rmvnCpp.cpp -o rmvnCpp.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rmvtCpp.cpp -o rmvtCpp.o
In file included from mvnfast.h:9,
                 from rmixnCpp.cpp:20:
sitmo/sitmo.hpp: In member function 'void sitmo::prng_engine::discard(uint64_t)':
sitmo/sitmo.hpp:224:9: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  224 |   if (z < 8 - _o_counter) {
      |       ~~^~~~~~~~~~~~~~~~
rmixnCpp.cpp: In function 'SEXPREC* rmixnCpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
rmixnCpp.cpp:55:10: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
   55 |     if(d != A.ncol()) stop("mu.n_cols != A.ncol()");
      |        ~~^~~~~~~~~~~
rmixnCpp.cpp:56:10: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
   56 |     if(n != A.nrow()) stop("n != A.nrow()");
      |        ~~^~~~~~~~~~~
rmixnCpp.cpp:75:24: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
   75 |     for(int ii = 0; ii < m; ii++)
      |                     ~~~^~~
In file included from mvnfast.h:9,
                 from rmixtCpp.cpp:20:
sitmo/sitmo.hpp: In member function 'void sitmo::prng_engine::discard(uint64_t)':
sitmo/sitmo.hpp:224:9: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  224 |   if (z < 8 - _o_counter) {
      |       ~~^~~~~~~~~~~~~~~~
rmixtCpp.cpp: In function 'SEXPREC* rmixtCpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
rmixtCpp.cpp:58:10: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
   58 |     if(d != A.ncol()) stop("mu.n_cols != A.ncol()");
      |        ~~^~~~~~~~~~~
rmixtCpp.cpp:59:10: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
   59 |     if(n != A.nrow()) stop("n != A.nrow()");
      |        ~~^~~~~~~~~~~
rmixtCpp.cpp:78:24: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
   78 |     for(int ii = 0; ii < m; ii++)
      |                     ~~~^~~
In file included from mvnfast.h:9,
                 from rmvnCpp.cpp:20:
sitmo/sitmo.hpp: In member function 'void sitmo::prng_engine::discard(uint64_t)':
sitmo/sitmo.hpp:224:9: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  224 |   if (z < 8 - _o_counter) {
      |       ~~^~~~~~~~~~~~~~~~
rmvnCpp.cpp: In function 'SEXPREC* rmvnCpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
rmvnCpp.cpp:52:12: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
   52 |       if(d != A.ncol()) stop("mu.n_elem != A.ncol()");
      |          ~~^~~~~~~~~~~
rmvnCpp.cpp:53:12: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
   53 |       if(n != A.nrow()) stop("n != A.nrow()");
      |          ~~^~~~~~~~~~~
In file included from mvnfast.h:9,
                 from rmvtCpp.cpp:20:
sitmo/sitmo.hpp: In member function 'void sitmo::prng_engine::discard(uint64_t)':
sitmo/sitmo.hpp:224:9: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  224 |   if (z < 8 - _o_counter) {
      |       ~~^~~~~~~~~~~~~~~~
rmvtCpp.cpp: In function 'SEXPREC* rmvtCpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
rmvtCpp.cpp:55:10: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
   55 |     if(d != A.ncol()) stop("mu.n_elem != A.ncol()");
      |        ~~^~~~~~~~~~~
rmvtCpp.cpp:56:10: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
   56 |     if(n != A.nrow()) stop("n != A.nrow()");
      |        ~~^~~~~~~~~~~
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o mvnfast.so dmixtCpp.o dmvtCpp.o init.o mahaCpp.o msCpp.o rmixnCpp.o rmixtCpp.o rmvnCpp.o rmvtCpp.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -fopenmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/mvnfast/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/mvnfast/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/mvnfast/src'
installing to /data/gannet/ripley/R/packages/tests-devel/mvnfast.Rcheck/00LOCK-mvnfast/00new/mvnfast/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mvnfast)