* installing *source* package ‘multinet’ ... ** package ‘multinet’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (GCC) 13.2.0’ using C++14 make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/multinet/src' g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c init.cpp -o init.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c r_functions.cpp -o r_functions.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c rcpp_module_definition.cpp -o rcpp_module_definition.o r_functions.cpp: In function 'RMLNetwork growMultiplex(size_t, long int, const Rcpp::GenericVector&, const Rcpp::NumericVector&, const Rcpp::NumericVector&, const Rcpp::NumericMatrix&)': r_functions.cpp:149:26: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 149 | if (dependency.nrow()!=num_layers || dependency.ncol()!=num_layers || | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ r_functions.cpp:149:59: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 149 | if (dependency.nrow()!=num_layers || dependency.ncol()!=num_layers || | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ r_functions.cpp:150:37: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 150 | pr_internal_event.size()!=num_layers || pr_external_event.size()!=num_layers) | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ r_functions.cpp:150:77: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 150 | pr_internal_event.size()!=num_layers || pr_external_event.size()!=num_layers) | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ r_functions.cpp:157:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'R_xlen_t' {aka 'long int'} [-Wsign-compare] 157 | for (size_t i=0; i >::size_type' {aka 'long unsigned int'} and 'R_xlen_t' {aka 'long int'} [-Wsign-compare] 1805 | if (vertices.size() != values.size() && values.size()!=1) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ r_functions.cpp:1873:26: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'R_xlen_t' {aka 'long int'} [-Wsign-compare] 1873 | if (edges.size() != values.size() && values.size()!=1) | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ r_functions.cpp: In function 'Rcpp::List to_list(const Rcpp::DataFrame&, const RMLNetwork&)': r_functions.cpp:3260:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 3260 | for (size_t i=0; isize()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~ r_functions.cpp:3347:28: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 3347 | else if (w_inter.size()==layers->size()) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ r_functions.cpp:3368:28: warning: comparison of integer expressions of different signedness: 'R_xlen_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 3368 | else if (gravity.size()==layers->size()) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from src/community/mlcpm.hpp:22, from r_functions.cpp:12: src/community/mlcpm.ipp: In instantiation of 'std::unique_ptr > uu::net::mlcpm(const M*, size_t, size_t) [with M = MultilayerNetwork; size_t = long unsigned int]': r_functions.cpp:3075:28: required from here src/community/mlcpm.ipp:35:20: warning: moving a temporary object prevents copy elision [-Wpessimizing-move] 35 | result->add(std::move(c->to_community())); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/community/mlcpm.ipp:35:20: note: remove 'std::move' call In file included from src/community/modularity.hpp:47, from r_functions.cpp:13: src/community/modularity.ipp: In instantiation of 'double uu::net::modularity(const M*, const COMM*, double) [with M = MultilayerNetwork; COMM = CommunityStructure]': r_functions.cpp:3203:31: required from here src/community/modularity.ipp:149:15: warning: unused variable 'actor' [-Wunused-variable] 149 | for (auto actor: *mnet->actors()) | ^~~~~ In file included from src/community/abacus.ipp:10, from src/community/abacus.hpp:30, from r_functions.cpp:8: src/community/_impl/PillarCommunity.hpp: In instantiation of 'std::unique_ptr > uu::net::to_vertex_layer_community_structure(const std::set > >&) [with M = MultilayerNetwork]': src/community/abacus.ipp:36:47: required from 'std::unique_ptr > uu::net::abacus(const M*, int, int) [with M = MultilayerNetwork]' r_functions.cpp:3131:42: required from here src/community/_impl/PillarCommunity.hpp:99:17: warning: moving a temporary object prevents copy elision [-Wpessimizing-move] 99 | res->add(std::move(to_vertex_layer_community(c.get()))); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/community/_impl/PillarCommunity.hpp:99:17: note: remove 'std::move' call r_functions.cpp: In function 'Rcpp::DataFrame getValues(const RMLNetwork&, const std::string&, const Rcpp::DataFrame&, const Rcpp::DataFrame&, const Rcpp::DataFrame&)': r_functions.cpp:1691:22: warning: 'att' may be used uninitialized [-Wmaybe-uninitialized] 1691 | res[att->name] = vec; | ~~~~~^~~~ r_functions.cpp:1572:36: note: 'att' was declared here 1572 | const uu::core::Attribute* att; | ^~~ r_functions.cpp:1558:22: warning: 'att' may be used uninitialized [-Wmaybe-uninitialized] 1558 | res[att->name] = vec; | ~~~~~^~~~ r_functions.cpp:1476:36: note: 'att' was declared here 1476 | const uu::core::Attribute* att; | ^~~ g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c rcpp_utils.cpp -o rcpp_utils.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/community/_impl/common.cpp -o src/community/_impl/common.o rcpp_utils.cpp: In function 'std::vector > resolve_const_vertices(const uu::net::MultilayerNetwork*, const Rcpp::DataFrame&)': rcpp_utils.cpp:237:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 237 | for (int i=0; i > resolve_vertices(uu::net::MultilayerNetwork*, const Rcpp::DataFrame&)': rcpp_utils.cpp:278:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 278 | for (int i=0; i > resolve_const_edges(const uu::net::MultilayerNetwork*, const Rcpp::DataFrame&)': rcpp_utils.cpp:322:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 322 | for (int i=0; i > resolve_edges(uu::net::MultilayerNetwork*, const Rcpp::DataFrame&)': rcpp_utils.cpp:398:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 398 | for (int i=0; i > to_communities(const Rcpp::DataFrame&, const uu::net::MultilayerNetwork*)': rcpp_utils.cpp:541:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 541 | for (size_t i=0; i*, FILE*) [with M = MultilayerNetwork]', inlined from 'std::set > > uu::net::read_eclat_communities(const M*, FILE*, FILE*) [with M = MultilayerNetwork]' at src/community/_impl/abacus_utils.ipp:462:23: src/community/_impl/abacus_utils.ipp:431:31: warning: 'id' may be used uninitialized [-Wmaybe-uninitialized] 431 | com->add_actor(mnet->actors()->at(id-1)); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ src/community/_impl/abacus_utils.ipp: In function 'std::set > > uu::net::read_eclat_communities(const M*, FILE*, FILE*) [with M = MultilayerNetwork]': src/community/_impl/abacus_utils.ipp:400:12: note: 'id' was declared here 400 | size_t id; | ^~ g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/community/_impl/glouvain2_utils.cpp -o src/community/_impl/glouvain2_utils.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/community/_impl/MetaNetwork.cpp -o src/community/_impl/MetaNetwork.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/community/_impl/GMetaNetwork.cpp -o src/community/_impl/GMetaNetwork.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/community/_impl/louvain_utils.cpp -o src/community/_impl/louvain_utils.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/community/optimize_slices.cpp -o src/community/optimize_slices.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/objects/Object.cpp -o src/core/objects/Object.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/utils/random.cpp -o src/core/utils/random.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/utils/NameIterator.cpp -o src/core/utils/NameIterator.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/utils/string.cpp -o src/core/utils/string.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/utils/CSVReader.cpp -o src/core/utils/CSVReader.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/utils/vector.cpp -o src/core/utils/vector.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/NullPtrException.cpp -o src/core/exceptions/NullPtrException.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/FileNotFoundException.cpp -o src/core/exceptions/FileNotFoundException.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/assert_not_null.cpp -o src/core/exceptions/assert_not_null.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/DuplicateElementException.cpp -o src/core/exceptions/DuplicateElementException.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/ExternalLibException.cpp -o src/core/exceptions/ExternalLibException.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/ElementNotFoundException.cpp -o src/core/exceptions/ElementNotFoundException.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/OutOfBoundsException.cpp -o src/core/exceptions/OutOfBoundsException.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/OperationNotSupportedException.cpp -o src/core/exceptions/OperationNotSupportedException.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/WrongParameterException.cpp -o src/core/exceptions/WrongParameterException.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/exceptions/WrongFormatException.cpp -o src/core/exceptions/WrongFormatException.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/attributes/Text.cpp -o src/core/attributes/Text.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/attributes/Attribute.cpp -o src/core/attributes/Attribute.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/attributes/conversion.cpp -o src/core/attributes/conversion.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/attributes/AttributeType.cpp -o src/core/attributes/AttributeType.o In file included from /usr/local/gcc13/include/c++/13.2.0/chrono:41, from src/core/attributes/Time.hpp:17, from src/core/attributes/conversion.hpp:13, from src/core/attributes/conversion.cpp:1: In static member function 'static constexpr _ToDur std::chrono::__duration_cast_impl<_ToDur, _CF, _CR, true, true>::__cast(const std::chrono::duration<_Rep, _Period>&) [with _Rep = long double; _Period = std::ratio<1>; _ToDur = std::chrono::duration; _CF = std::ratio<1>; _CR = long double]', inlined from 'constexpr std::chrono::__enable_if_is_duration<_ToDur> std::chrono::duration_cast(const duration<_Rep, _Period>&) [with _ToDur = duration; _Rep = long double; _Period = std::ratio<1>]' at /usr/local/gcc13/include/c++/13.2.0/bits/chrono.h:287:23, inlined from 'constexpr typename std::enable_if::value, To>::type date::trunc(const std::chrono::duration<_Rep, _Period>&) [with To = std::chrono::duration; Rep = long double; Period = std::ratio<1>]' at src/core/attributes/date.hpp:1438:59, inlined from 'constexpr typename std::enable_if::value, To>::type date::floor(const std::chrono::duration<_Rep, _Period>&) [with To = std::chrono::duration; Rep = long double; Period = std::ratio<1>]' at src/core/attributes/date.hpp:1481:23, inlined from 'constexpr To date::round(const std::chrono::duration<_Rep, _Period>&) [with To = std::chrono::duration; Rep = long double; Period = std::ratio<1>]' at src/core/attributes/date.hpp:1511:24, inlined from 'std::basic_istream<_CharT, _Traits>& date::from_stream(std::basic_istream<_CharT, _Traits>&, const CharT*, fields&, std::__cxx11::basic_string*, std::chrono::minutes*) [with CharT = char; Traits = std::char_traits; Duration = std::chrono::duration; Alloc = std::allocator]' at src/core/attributes/date.hpp:8216:36: /usr/local/gcc13/include/c++/13.2.0/bits/chrono.h:199:27: warning: 'S' may be used uninitialized [-Wmaybe-uninitialized] 199 | return _ToDur(static_cast<__to_rep>(__d.count())); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from src/core/attributes/Time.hpp:18: src/core/attributes/date.hpp: In function 'std::basic_istream<_CharT, _Traits>& date::from_stream(std::basic_istream<_CharT, _Traits>&, const CharT*, fields&, std::__cxx11::basic_string*, std::chrono::minutes*) [with CharT = char; Traits = std::char_traits; Duration = std::chrono::duration; Alloc = std::allocator]': src/core/attributes/date.hpp:8214:37: note: 'S' was declared here 8214 | long double S; | ^ g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/attributes/Time.cpp -o src/core/attributes/Time.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/core/observers/ObserverStore.cpp -o src/core/observers/ObserverStore.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/generation/communities.cpp -o src/generation/communities.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/generation/erdos_renyi.cpp -o src/generation/erdos_renyi.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/generation/standard_graphs.cpp -o src/generation/standard_graphs.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/_impl/read_ml_common.cpp -o src/io/_impl/read_ml_common.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/_impl/read_common.cpp -o src/io/_impl/read_common.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/_impl/GraphIOFileSection.cpp -o src/io/_impl/GraphIOFileSection.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/read_network.cpp -o src/io/read_network.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/write_multilayer_network.cpp -o src/io/write_multilayer_network.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/read_probabilistic_network.cpp -o src/io/read_probabilistic_network.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/read_weighted_network.cpp -o src/io/read_weighted_network.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/read_multilayer_network.cpp -o src/io/read_multilayer_network.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/io/read_temporal_network.cpp -o src/io/read_temporal_network.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/layout/multiforce.cpp -o src/layout/multiforce.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/MultilayerNetwork.cpp -o src/networks/MultilayerNetwork.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/Network.cpp -o src/networks/Network.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/stores/LayerStore.cpp -o src/networks/_impl/stores/LayerStore.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/stores/MLECubeStore.cpp -o src/networks/_impl/stores/MLECubeStore.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/stores/VertexStore.cpp -o src/networks/_impl/stores/VertexStore.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/stores/SimpleEdgeStore.cpp -o src/networks/_impl/stores/SimpleEdgeStore.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/stores/MultiEdgeStore.cpp -o src/networks/_impl/stores/MultiEdgeStore.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/stores/EdgeStore.cpp -o src/networks/_impl/stores/EdgeStore.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/observers/CheckVerticesExistObserver.cpp -o src/networks/_impl/observers/CheckVerticesExistObserver.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/_impl/observers/NoLoopCheckObserver2.cpp -o src/networks/_impl/observers/NoLoopCheckObserver2.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/OrderedMultiplexNetwork.cpp -o src/networks/OrderedMultiplexNetwork.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/MultiNetwork.cpp -o src/networks/MultiNetwork.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/weight.cpp -o src/networks/weight.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/probability.cpp -o src/networks/probability.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/networks/time.cpp -o src/networks/time.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Dyad.cpp -o src/objects/Dyad.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Walk.cpp -o src/objects/Walk.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Triad.cpp -o src/objects/Triad.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Path.cpp -o src/objects/Path.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/MLVertex.cpp -o src/objects/MLVertex.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Trail.cpp -o src/objects/Trail.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Vertex.cpp -o src/objects/Vertex.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/objects/Edge.cpp -o src/objects/Edge.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/MECube.cpp -o src/olap/MECube.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/indexing.cpp -o src/olap/indexing.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/VCube.cpp -o src/olap/VCube.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/sel/Indexes.cpp -o src/olap/sel/Indexes.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/sel/Range.cpp -o src/olap/sel/Range.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/sel/Set.cpp -o src/olap/sel/Set.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/sel/All.cpp -o src/olap/sel/All.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/sel/IndexIterator.cpp -o src/olap/sel/IndexIterator.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/ECube.cpp -o src/olap/ECube.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/olap/time.cpp -o src/olap/time.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/operations/slice.cpp -o src/operations/slice.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/operations/sample.cpp -o src/operations/sample.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c src/utils/summary.cpp -o src/utils/summary.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/Network.cpp -o infomap/infomap/Network.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/FlowNetwork.cpp -o infomap/infomap/FlowNetwork.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/Node.cpp -o infomap/infomap/Node.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/TreeData.cpp -o infomap/infomap/TreeData.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/InfomapContext.cpp -o infomap/infomap/InfomapContext.o In file included from infomap/infomap/InfomapGreedyTypeSpecialized.h:31, from infomap/infomap/InfomapContext.cpp:30: infomap/infomap/InfomapGreedyCommon.h:1022: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 1022 | #pragma omp parallel for schedule(dynamic) // Use dynamic scheduling as some threads could end early | infomap/infomap/InfomapGreedyCommon.h:1184: warning: ignoring '#pragma omp critical' [-Wunknown-pragmas] 1184 | #pragma omp critical (moveUpdate) | g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/NetworkAdapter.cpp -o infomap/infomap/NetworkAdapter.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/MultiplexNetwork.cpp -o infomap/infomap/MultiplexNetwork.o infomap/infomap/MultiplexNetwork.cpp: In member function 'std::map::const_iterator* infomap::MultiplexNetwork::getUndirLinkItPtr(std::vector >, std::_Rb_tree_const_iterator > > >&)': infomap/infomap/MultiplexNetwork.cpp:1090:12: warning: 'linkIt' may be used uninitialized [-Wmaybe-uninitialized] 1090 | return linkIt; | ^~~~~~ infomap/infomap/MultiplexNetwork.cpp:1068:35: note: 'linkIt' was declared here 1068 | IntraLinkMap::const_iterator *linkIt; | ^~~~~~ g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/MemoryNetworkAdapter.cpp -o infomap/infomap/MemoryNetworkAdapter.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/MemNetwork.cpp -o infomap/infomap/MemNetwork.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/MemFlowNetwork.cpp -o infomap/infomap/MemFlowNetwork.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/infomap/InfomapBase.cpp -o infomap/infomap/InfomapBase.o infomap/infomap/InfomapBase.cpp:1946: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 1946 | #pragma omp parallel for schedule(dynamic) | g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/io/HierarchicalNetwork.cpp -o infomap/io/HierarchicalNetwork.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/io/TreeDataWriter.cpp -o infomap/io/TreeDataWriter.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/io/BipartiteClusterReader.cpp -o infomap/io/BipartiteClusterReader.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/io/version.cpp -o infomap/io/version.o infomap/io/version.cpp:34:20: warning: 'INFOMAP_VERSION' initialized and declared 'extern' 34 | extern const char* INFOMAP_VERSION = "0.19.15"; | ^~~~~~~~~~~~~~~ g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/io/ClusterReader.cpp -o infomap/io/ClusterReader.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/io/ProgramInterface.cpp -o infomap/io/ProgramInterface.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/utils/FileURI.cpp -o infomap/utils/FileURI.o g++-13 -std=gnu++14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Isrc -Ilibs -Ieigen3 -Ispectra -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -Iinfomap -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c infomap/utils/Logger.cpp -o infomap/utils/Logger.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/apriori/src/istree.c -o eclat/apriori/src/istree.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/eclat/src/eclat.c -o eclat/eclat/src/eclat.o eclat/eclat/src/eclat.c: In function 'rec_odcm': eclat/eclat/src/eclat.c:3485:30: warning: 'r' may be used uninitialized [-Wmaybe-uninitialized] 3485 | return (r < 0) ? (SUPP)r : max; /* return error status/max. support */ | ~~~~~~~~~~~~~~~~~~^~~~~ eclat/eclat/src/eclat.c:3365:16: note: 'r' was declared here 3365 | int r; /* error status */ | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/math/src/chi2.c -o eclat/math/src/chi2.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/math/src/gamma.c -o eclat/math/src/gamma.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/math/src/ruleval.c -o eclat/math/src/ruleval.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/tract/src/report.c -o eclat/tract/src/report.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/tract/src/tract.c -o eclat/tract/src/tract.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/tract/src/patspec.c -o eclat/tract/src/patspec.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/tract/src/fim16.c -o eclat/tract/src/fim16.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/tract/src/clomax.c -o eclat/tract/src/clomax.o eclat/tract/src/fim16.c: In function 'rec_pos': eclat/tract/src/fim16.c:795:5: warning: 'memset' used with length equal to number of elements without multiplication by element size [-Wmemset-elt-size] 795 | memset(fim->supps, 0, 4*sizeof(SUPP)); /* support and lists */ | ^~~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/util/src/scanner.c -o eclat/util/src/scanner.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/util/src/arrays.c -o eclat/util/src/arrays.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/util/src/escape.c -o eclat/util/src/escape.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/util/src/memsys.c -o eclat/util/src/memsys.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/util/src/tabread.c -o eclat/util/src/tabread.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/util/src/tabwrite.c -o eclat/util/src/tabwrite.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DNS_INFOMAP -DONLY_C_LOCALE=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Ieclat/eclat/src -Ieclat/tract/src -Ieclat/math/src -Ieclat/util/src -Ieclat/apriori/src -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eclat/util/src/symtab.c -o eclat/util/src/symtab.o g++-13 -std=gnu++14 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o multinet.so RcppExports.o init.o r_functions.o rcpp_module_definition.o rcpp_utils.o src/community/_impl/common.o src/community/_impl/glouvain2_utils.o src/community/_impl/MetaNetwork.o src/community/_impl/GMetaNetwork.o src/community/_impl/louvain_utils.o src/community/optimize_slices.o src/core/objects/Object.o src/core/utils/random.o src/core/utils/NameIterator.o src/core/utils/string.o src/core/utils/CSVReader.o src/core/utils/vector.o src/core/exceptions/NullPtrException.o src/core/exceptions/FileNotFoundException.o src/core/exceptions/assert_not_null.o src/core/exceptions/DuplicateElementException.o src/core/exceptions/ExternalLibException.o src/core/exceptions/ElementNotFoundException.o src/core/exceptions/OutOfBoundsException.o src/core/exceptions/OperationNotSupportedException.o src/core/exceptions/WrongParameterException.o src/core/exceptions/WrongFormatException.o src/core/attributes/Text.o src/core/attributes/Attribute.o src/core/attributes/conversion.o src/core/attributes/AttributeType.o src/core/attributes/Time.o src/core/observers/ObserverStore.o src/generation/communities.o src/generation/erdos_renyi.o src/generation/standard_graphs.o src/io/_impl/read_ml_common.o src/io/_impl/read_common.o src/io/_impl/GraphIOFileSection.o src/io/read_network.o src/io/write_multilayer_network.o src/io/read_probabilistic_network.o src/io/read_weighted_network.o src/io/read_multilayer_network.o src/io/read_temporal_network.o src/layout/multiforce.o src/networks/MultilayerNetwork.o src/networks/Network.o src/networks/_impl/stores/LayerStore.o src/networks/_impl/stores/MLECubeStore.o src/networks/_impl/stores/VertexStore.o src/networks/_impl/stores/SimpleEdgeStore.o src/networks/_impl/stores/MultiEdgeStore.o src/networks/_impl/stores/EdgeStore.o src/networks/_impl/observers/CheckVerticesExistObserver.o src/networks/_impl/observers/NoLoopCheckObserver2.o src/networks/OrderedMultiplexNetwork.o src/networks/MultiNetwork.o src/networks/weight.o src/networks/probability.o src/networks/time.o src/objects/Dyad.o src/objects/Walk.o src/objects/Triad.o src/objects/Path.o src/objects/MLVertex.o src/objects/Trail.o src/objects/Vertex.o src/objects/Edge.o src/olap/MECube.o src/olap/indexing.o src/olap/VCube.o src/olap/sel/Indexes.o src/olap/sel/Range.o src/olap/sel/Set.o src/olap/sel/All.o src/olap/sel/IndexIterator.o src/olap/ECube.o src/olap/time.o src/operations/slice.o src/operations/sample.o src/utils/summary.o infomap/infomap/Network.o infomap/infomap/FlowNetwork.o infomap/infomap/Node.o infomap/infomap/TreeData.o infomap/infomap/InfomapContext.o infomap/infomap/NetworkAdapter.o infomap/infomap/MultiplexNetwork.o infomap/infomap/MemoryNetworkAdapter.o infomap/infomap/MemNetwork.o infomap/infomap/MemFlowNetwork.o infomap/infomap/InfomapBase.o infomap/io/HierarchicalNetwork.o infomap/io/TreeDataWriter.o infomap/io/BipartiteClusterReader.o infomap/io/version.o infomap/io/ClusterReader.o infomap/io/ProgramInterface.o infomap/utils/FileURI.o infomap/utils/Logger.o eclat/apriori/src/istree.o eclat/eclat/src/eclat.o eclat/math/src/chi2.o eclat/math/src/gamma.o eclat/math/src/ruleval.o eclat/tract/src/report.o eclat/tract/src/tract.o eclat/tract/src/patspec.o eclat/tract/src/fim16.o eclat/tract/src/clomax.o eclat/util/src/scanner.o eclat/util/src/arrays.o eclat/util/src/escape.o eclat/util/src/memsys.o eclat/util/src/tabread.o eclat/util/src/tabwrite.o eclat/util/src/symtab.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/multinet/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/multinet/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/multinet/src' installing to /data/gannet/ripley/R/packages/tests-devel/multinet.Rcheck/00LOCK-multinet/00new/multinet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (multinet)