* installing *source* package ‘multilevLCA’ ...
** package ‘multilevLCA’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/multilevLCA/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c LCAfit.cpp -o LCAfit.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c SafeFunctions.cpp -o SafeFunctions.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c Utils.cpp -o Utils.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c multilevLC_EM.cpp -o multilevLC_EM.o
multilevLC_EM.cpp: In function 'Rcpp::List MLTLCA_covlowhigh_poly(arma::mat, arma::mat, arma::mat, arma::vec, arma::mat, arma::cube, arma::mat, arma::mat, arma::ivec, int, double, int, int, double, int)':
multilevLC_EM.cpp:363:7: warning: unused variable 'l' [-Wunused-variable]
  363 |   int l,n,j,k,m,t,p,v;
      |       ^
multilevLC_EM.cpp:644:7: warning: unused variable 'iItemref' [-Wunused-variable]
  644 |   int iItemref = 0;
      |       ^~~~~~~~
multilevLC_EM.cpp: In function 'Rcpp::List MLTLCA_cov_poly(arma::mat, arma::mat, arma::vec, arma::vec, arma::cube, arma::mat, arma::mat, arma::ivec, int, double, int, int, double, int)':
multilevLC_EM.cpp:797:13: warning: unused variable 'l' [-Wunused-variable]
  797 |   int n,j,k,l,m,t,p,v;
      |             ^
multilevLC_EM.cpp:1053:7: warning: unused variable 'iItemref' [-Wunused-variable]
 1053 |   int iItemref = 0;
      |       ^~~~~~~~
multilevLC_EM.cpp: In function 'Rcpp::List MLTLCA_poly(arma::mat, arma::vec, arma::vec, arma::mat, arma::mat, arma::ivec, int, double, int)':
multilevLC_EM.cpp:1436:7: warning: unused variable 'iItemref' [-Wunused-variable]
 1436 |   int iItemref = 0;
      |       ^~~~~~~~
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o multilevLCA.so LCAfit.o RcppExports.o SafeFunctions.o Utils.o multilevLC_EM.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/multilevLCA/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/multilevLCA/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/multilevLCA/src'
installing to /data/gannet/ripley/R/packages/tests-devel/multilevLCA.Rcheck/00LOCK-multilevLCA/00new/multilevLCA/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (multilevLCA)