* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/esaddle.Rcheck’
* using R Under development (unstable) (2024-04-05 r86344)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc-13 (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘esaddle/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘esaddle’ version ‘0.0.7’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘esaddle’ can be installed ... [35s/41s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/esaddle-00install.html' for details.
* used C compiler: ‘gcc-13 (GCC) 13.2.0’
* used C++ compiler: ‘g++-13 (GCC) 13.2.0’
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [8s/11s] OK
* checking Rd files ... NOTE
checkRd: (-1) dsaddle.Rd:39-40: Lost braces in \itemize; meant \describe ?
checkRd: (-1) dsaddle.Rd:41: Lost braces in \itemize; meant \describe ?
checkRd: (-1) dsaddle.Rd:42-43: Lost braces in \itemize; meant \describe ?
checkRd: (-1) dsaddle.Rd:44-45: Lost braces in \itemize; meant \describe ?
checkRd: (-1) dsaddle.Rd:46-48: Lost braces in \itemize; meant \describe ?
checkRd: (-1) dsaddle.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dsaddle.Rd:62-63: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dsaddle.Rd:64-65: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dsaddle.Rd:66-67: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dsaddle.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dsaddle.Rd:69: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ecgf.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ecgf.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) ecgf.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) robCov.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) robCov.Rd:20-21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) robCov.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) robCov.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) robCov.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) robCov.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) robCov.Rd:26-27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) selectDecay.Rd:48-49: Lost braces in \itemize; meant \describe ?
checkRd: (-1) selectDecay.Rd:50-51: Lost braces in \itemize; meant \describe ?
checkRd: (-1) selectDecay.Rd:52-53: Lost braces in \itemize; meant \describe ?
checkRd: (-1) selectDecay.Rd:54-55: Lost braces in \itemize; meant \describe ?
checkRd: (-1) selectDecay.Rd:63-64: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) selectDecay.Rd:65: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) selectDecay.Rd:66: Lost braces in \itemize; \value handles \item{}{} directly
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [15s/18s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... OK
  Running ‘test-all.R’
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [27s/76s] OK
* checking PDF version of manual ... [7s/11s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE