* installing *source* package ‘eiPack’ ... ** package ‘eiPack’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/eiPack/src' gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c eiutil.c -o eiutil.o eiutil.c: In function 'write_beta': eiutil.c:127:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 127 | int ret=0; | ^~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c rbycei.c -o rbycei.o rbycei.c: In function 'rbycei_fcn1': rbycei.c:195:8: warning: 'b_draws' may be used uninitialized [-Wmaybe-uninitialized] 195 | REAL(b_draws)[counter + qq*samp] = REAL(betaarray)[qq]; | ^~~~~~~~~~~~~ rbycei.c:41:31: note: 'b_draws' was declared here 41 | SEXP a_acc, b_acc, a_draws, b_draws, ccount_draws, output_list; | ^~~~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c rbycei2.c -o rbycei2.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c rbyceicov2.c -o rbyceicov2.o rbycei2.c: In function 'rbycei_fcn2': rbycei2.c:254:8: warning: 'b_draws' may be used uninitialized [-Wmaybe-uninitialized] 254 | REAL(b_draws)[counter + qq*samp] = REAL(betaarray)[qq]; | ^~~~~~~~~~~~~ rbycei2.c:48:31: note: 'b_draws' was declared here 48 | SEXP a_acc, b_acc, a_draws, b_draws, ccount_draws, usr_draws, output_list; | ^~~~~~~ rbyceicov2.c: In function 'rbycei_fcn3': rbyceicov2.c:388:8: warning: 'b_draws' may be used uninitialized [-Wmaybe-uninitialized] 388 | REAL(b_draws)[counter + qq*samp] = REAL(betaarray)[qq]; | ^~~~~~~~~~~~~ rbyceicov2.c:55:18: note: 'b_draws' was declared here 55 | SEXP dr_draws, b_draws, g_draws, d_draws, ccount_draws, output_list; | ^~~~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c rbyceicov4.c -o rbyceicov4.o rbyceicov4.c: In function 'rbycei_fcn4': rbyceicov4.c:407:8: warning: 'b_draws' may be used uninitialized [-Wmaybe-uninitialized] 407 | REAL(b_draws)[counter + qq*samp] = REAL(betaarray)[qq]; | ^~~~~~~~~~~~~ rbyceicov4.c:57:18: note: 'b_draws' was declared here 57 | SEXP dr_draws, b_draws, g_draws, d_draws, ccount_draws, usr_draws, output_list; | ^~~~~~~ gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o eiPack.so eiutil.o init.o rbycei.o rbycei2.o rbyceicov2.o rbyceicov4.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/eiPack/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/eiPack/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/eiPack/src' installing to /data/gannet/ripley/R/packages/tests-devel/eiPack.Rcheck/00LOCK-eiPack/00new/eiPack/libs ** R ** data ** demo ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (eiPack)