* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/dsa.Rcheck’ * using R Under development (unstable) (2024-04-05 r86344) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-13 (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘dsa/DESCRIPTION’ ... OK * this is package ‘dsa’ version ‘1.0.12’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘dsa’ can be installed ... [15s/18s] OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/dsa-00install.html' for details. * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE Namespaces in Imports field not imported from: ‘rJava’ ‘tools’ All declared Imports should be used. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [22s/26s] OK * checking Rd files ... NOTE checkRd: (-1) dsa.Rd:122: Lost braces; missing escapes or markup? 122 | {output} {Contains the calendar and seasonally adjusted series, original series, implicit calendar and seasonal component, and Loess based trend as an \code{xts} object} | ^ checkRd: (-1) dsa.Rd:122: Lost braces 122 | {output} {Contains the calendar and seasonally adjusted series, original series, implicit calendar and seasonal component, and Loess based trend as an \code{xts} object} | ^ checkRd: (-1) dsa.Rd:124: Lost braces; missing escapes or markup? 124 | {fourier_terms} {The number of sine and cosine terms used to model the seasonal pattern in the RegARIMA model} | ^ checkRd: (-1) dsa.Rd:124: Lost braces; missing escapes or markup? 124 | {fourier_terms} {The number of sine and cosine terms used to model the seasonal pattern in the RegARIMA model} | ^ checkRd: (-1) dsa.Rd:126: Lost braces; missing escapes or markup? 126 | {reg} {RegARIMA results} | ^ checkRd: (-1) dsa.Rd:126: Lost braces; missing escapes or markup? 126 | {reg} {RegARIMA results} | ^ checkRd: (-1) dsa.Rd:128: Lost braces; missing escapes or markup? 128 | {info} {Basic information on transformation (Log/Level), differencing and forecast horizon} | ^ checkRd: (-1) dsa.Rd:128: Lost braces; missing escapes or markup? 128 | {info} {Basic information on transformation (Log/Level), differencing and forecast horizon} | ^ checkRd: (-1) dsa.Rd:130: Lost braces; missing escapes or markup? 130 | {stl} {A list of length 3, containing the STL results of the day-of-week, day-of-the-month and day-of-the-year adjustment, respectively} | ^ checkRd: (-1) dsa.Rd:130: Lost braces; missing escapes or markup? 130 | {stl} {A list of length 3, containing the STL results of the day-of-week, day-of-the-month and day-of-the-year adjustment, respectively} | ^ checkRd: (-1) dsa.Rd:132: Lost braces; missing escapes or markup? 132 | {outlier} {Result of the outlier adjustment} | ^ checkRd: (-1) dsa.Rd:132: Lost braces; missing escapes or markup? 132 | {outlier} {Result of the outlier adjustment} | ^ checkRd: (-1) dsa.Rd:134: Lost braces; missing escapes or markup? 134 | {sa_result} {The original series and the intermediate adjustment results after the day-of-week adjustment (s1_adjusted), calendar adjustment (s1k1_adjusted), day-of-the-month adjustment (s1k1s2_adjusted), and the final adjusted series after the day-of-the-year adjustment (seas_adj) as an \code{xts} object} | ^ checkRd: (-1) dsa.Rd:134: Lost braces 134 | {sa_result} {The original series and the intermediate adjustment results after the day-of-week adjustment (s1_adjusted), calendar adjustment (s1k1_adjusted), day-of-the-month adjustment (s1k1s2_adjusted), and the final adjusted series after the day-of-the-year adjustment (seas_adj) as an \code{xts} object} | ^ checkRd: (-1) dsa.Rd:136: Lost braces; missing escapes or markup? 136 | {sa_result2} {The original series only adjusted for single components as an \code{xts} object. Namely the original series itself (original), the original only adjusted for the day-of-the week (s1_adjusted), calendar (k1_adjusted), day-of-the-month (s2_adjusted), and day-of-the-year (s3_adjusted)} | ^ checkRd: (-1) dsa.Rd:136: Lost braces 136 | {sa_result2} {The original series only adjusted for single components as an \code{xts} object. Namely the original series itself (original), the original only adjusted for the day-of-the week (s1_adjusted), calendar (k1_adjusted), day-of-the-month (s2_adjusted), and day-of-the-year (s3_adjusted)} | ^ checkRd: (-1) dsa.Rd:138: Lost braces; missing escapes or markup? 138 | {sfac_result} {The seasonal and calendar components as an \code{xts} object. Namely, the day-of-the-week (s1_fac), calendar (cal_fac), day-of-the-month (s2_fac), and day-of-the-year component (s3_fac) } | ^ checkRd: (-1) dsa.Rd:138: Lost braces 138 | {sfac_result} {The seasonal and calendar components as an \code{xts} object. Namely, the day-of-the-week (s1_fac), calendar (cal_fac), day-of-the-month (s2_fac), and day-of-the-year component (s3_fac) } | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [52s/65s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [312s/406s] OK * checking PDF version of manual ... [10s/15s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 NOTEs