* installing *source* package ‘diffmatchpatch’ ... ** package ‘diffmatchpatch’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/diffmatchpatch/src' g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c diff.cpp -o diff.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c match.cpp -o match.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c options.cpp -o options.o In file included from common.h:4, from match.cpp:1: ../inst/include/diff_match_patch.h: In instantiation of 'int diff_match_patch::match_bitap(const string_t&, const string_t&, int) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; string_t = std::__cxx11::basic_string]': ../inst/include/diff_match_patch.h:1631:14: required from 'int diff_match_patch::match_main(const string_t&, const string_t&, int) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; string_t = std::__cxx11::basic_string]' match.cpp:42:27: required from here ../inst/include/diff_match_patch.h:1723:26: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 1723 | if (best_loc > loc) { | ~~~~~~~~~^~~~~ In file included from common.h:4, from diff.cpp:1: ../inst/include/diff_match_patch.h: In instantiation of 'static diff_match_patch::Diffs diff_match_patch::diff_fromDelta(const string_t&, const string_t&) [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; Diffs = std::__cxx11::list >::Diff, std::allocator >::Diff> >; string_t = std::__cxx11::basic_string]': diff.cpp:122:31: required from here ../inst/include/diff_match_patch.h:1596:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1596 | if (pointer != text1.length()) { | ~~~~~~~~^~~~~~~~~~~~~~~~~ ../inst/include/diff_match_patch.h: In member function 'int diff_match_patch::match_bitap(const string_t&, const string_t&, int) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits]': ../inst/include/diff_match_patch.h:1741:5: warning: 'rd' may be used uninitialized [-Wmaybe-uninitialized] 1741 | delete [] rd; | ^~~~~~~~~~~~ ../inst/include/diff_match_patch.h:1674:10: note: 'rd' was declared here 1674 | int *rd; | ^~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include/ -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c patch.cpp -o patch.o In file included from common.h:4, from patch.cpp:2: ../inst/include/diff_match_patch.h: In instantiation of 'int diff_match_patch::match_bitap(const string_t&, const string_t&, int) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; string_t = std::__cxx11::basic_string]': ../inst/include/diff_match_patch.h:1631:14: required from 'int diff_match_patch::match_main(const string_t&, const string_t&, int) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; string_t = std::__cxx11::basic_string]' ../inst/include/diff_match_patch.h:2007:21: required from 'void diff_match_patch::patch_apply(const Patches&, const string_t&, std::pair >&) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; Patches = std::__cxx11::list >::Patch, std::allocator >::Patch> >; string_t = std::__cxx11::basic_string]' ../inst/include/diff_match_patch.h:1973:63: required from 'std::pair > diff_match_patch::patch_apply(const Patches&, const string_t&) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; Patches = std::__cxx11::list >::Patch, std::allocator >::Patch> >; string_t = std::__cxx11::basic_string]' patch.cpp:23:29: required from here ../inst/include/diff_match_patch.h:1723:26: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 1723 | if (best_loc > loc) { | ~~~~~~~~~^~~~~ ../inst/include/diff_match_patch.h: In member function 'int diff_match_patch::match_bitap(const string_t&, const string_t&, int) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits]': ../inst/include/diff_match_patch.h:1741:5: warning: 'rd' may be used uninitialized [-Wmaybe-uninitialized] 1741 | delete [] rd; | ^~~~~~~~~~~~ ../inst/include/diff_match_patch.h:1674:10: note: 'rd' was declared here 1674 | int *rd; | ^~ g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o diffmatchpatch.so RcppExports.o diff.o match.o options.o patch.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/diffmatchpatch/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/diffmatchpatch/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/diffmatchpatch/src' installing to /data/gannet/ripley/R/packages/tests-devel/diffmatchpatch.Rcheck/00LOCK-diffmatchpatch/00new/diffmatchpatch/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (diffmatchpatch)