* installing *source* package ‘crfsuite’ ...
** package ‘crfsuite’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/crfsuite/src'
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c cqdb/src/cqdb.c -o cqdb/src/cqdb.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c cqdb/src/lookup3.c -o cqdb/src/lookup3.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c liblbfgs/lib/lbfgs.c -o liblbfgs/lib/lbfgs.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crf1d_context.c -o crf/src/crf1d_context.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crf1d_encode.c -o crf/src/crf1d_encode.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crf1d_feature.c -o crf/src/crf1d_feature.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crf1d_model.c -o crf/src/crf1d_model.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crf1d_tag.c -o crf/src/crf1d_tag.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crfsuite.c -o crf/src/crfsuite.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crfsuite_train.c -o crf/src/crfsuite_train.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/dataset.c -o crf/src/dataset.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/dictionary.c -o crf/src/dictionary.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/holdout.c -o crf/src/holdout.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/logging.c -o crf/src/logging.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/params.c -o crf/src/params.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/quark.c -o crf/src/quark.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/rumavl.c -o crf/src/rumavl.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/train_arow.c -o crf/src/train_arow.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/train_averaged_perceptron.c -o crf/src/train_averaged_perceptron.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/train_l2sgd.c -o crf/src/train_l2sgd.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/train_lbfgs.c -o crf/src/train_lbfgs.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/train_passive_aggressive.c -o crf/src/train_passive_aggressive.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rcpp_crfsuite.cpp -o rcpp_crfsuite.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o crfsuite.so cqdb/src/cqdb.o cqdb/src/lookup3.o liblbfgs/lib/lbfgs.o crf/src/crf1d_context.o crf/src/crf1d_encode.o crf/src/crf1d_feature.o crf/src/crf1d_model.o crf/src/crf1d_tag.o crf/src/crfsuite.o crf/src/crfsuite_train.o crf/src/dataset.o crf/src/dictionary.o crf/src/holdout.o crf/src/logging.o crf/src/params.o crf/src/quark.o crf/src/rumavl.o crf/src/train_arow.o crf/src/train_averaged_perceptron.o crf/src/train_l2sgd.o crf/src/train_lbfgs.o crf/src/train_passive_aggressive.o rcpp_crfsuite.o RcppExports.o
rm -f cqdb/src/cqdb.o cqdb/src/lookup3.o liblbfgs/lib/lbfgs.o crf/src/crf1d_context.o crf/src/crf1d_encode.o crf/src/crf1d_feature.o crf/src/crf1d_model.o crf/src/crf1d_tag.o crf/src/crfsuite.o crf/src/crfsuite_train.o crf/src/dataset.o crf/src/dictionary.o crf/src/holdout.o crf/src/logging.o crf/src/params.o crf/src/quark.o crf/src/rumavl.o crf/src/train_arow.o crf/src/train_averaged_perceptron.o crf/src/train_l2sgd.o crf/src/train_lbfgs.o crf/src/train_passive_aggressive.o rcpp_crfsuite.o RcppExports.o 
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/crfsuite/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/crfsuite/src'
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c cqdb/src/cqdb.c -o cqdb/src/cqdb.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c cqdb/src/lookup3.c -o cqdb/src/lookup3.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c liblbfgs/lib/lbfgs.c -o liblbfgs/lib/lbfgs.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crf1d_context.c -o crf/src/crf1d_context.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crf1d_encode.c -o crf/src/crf1d_encode.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crf1d_feature.c -o crf/src/crf1d_feature.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crf1d_model.c -o crf/src/crf1d_model.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crf1d_tag.c -o crf/src/crf1d_tag.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crfsuite.c -o crf/src/crfsuite.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/crfsuite_train.c -o crf/src/crfsuite_train.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/dataset.c -o crf/src/dataset.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/dictionary.c -o crf/src/dictionary.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/holdout.c -o crf/src/holdout.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/logging.c -o crf/src/logging.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/params.c -o crf/src/params.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/quark.c -o crf/src/quark.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/rumavl.c -o crf/src/rumavl.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/train_arow.c -o crf/src/train_arow.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/train_averaged_perceptron.c -o crf/src/train_averaged_perceptron.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/train_l2sgd.c -o crf/src/train_l2sgd.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/train_lbfgs.c -o crf/src/train_lbfgs.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c crf/src/train_passive_aggressive.c -o crf/src/train_passive_aggressive.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rcpp_crfsuite.cpp -o rcpp_crfsuite.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./cqdb/include -I./crf/src -I./liblbfgs/include -I./include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/crfsuite/src'
installing to /data/gannet/ripley/R/packages/tests-devel/crfsuite.Rcheck/00LOCK-crfsuite/00new/crfsuite/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (crfsuite)