* installing *source* package ‘conquer’ ... ** package ‘conquer’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (GCC) 13.2.0’ using C++17 make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/conquer/src' g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c defFun.cpp -o defFun.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c highdGauss.cpp -o highdGauss.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c highdLogistic.cpp -o highdLogistic.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c highdPara.cpp -o highdPara.o defFun.cpp: In function 'void lossQr(const arma::mat&, const arma::vec&, const arma::vec&, double, int, arma::vec&, arma::vec&)': defFun.cpp:33:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare] 33 | for (int k = 0; k < res.size(); k++) { | ~~^~~~~~~~~~~~ defFun.cpp: In function 'double lossL2(const arma::mat&, const arma::vec&, const arma::vec&, double, double)': defFun.cpp:51:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare] 51 | for (int i = 0; i < Y.size(); i++) { | ~~^~~~~~~~~~ defFun.cpp: In function 'double updateL2(const arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, double, double)': defFun.cpp:62:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare] 62 | for (int i = 0; i < Y.size(); i++) { | ~~^~~~~~~~~~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c highdTrian.cpp -o highdTrian.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c highdUnif.cpp -o highdUnif.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c lowd.cpp -o lowd.o highdPara.cpp: In function 'double lossParaHd(const arma::mat&, const arma::vec&, const arma::vec&, double, double, double, double)': highdPara.cpp:11:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare] 11 | for (int i = 0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ highdPara.cpp: In function 'double updateParaHd(const arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, double, double, double, double, double)': highdPara.cpp:24:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare] 24 | for (int i = 0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ highdTrian.cpp: In function 'double lossTrianHd(const arma::mat&, const arma::vec&, const arma::vec&, double, double, double, double)': highdTrian.cpp:11:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare] 11 | for (int i = 0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ highdTrian.cpp: In function 'double updateTrianHd(const arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, double, double, double, double, double)': highdTrian.cpp:24:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare] 24 | for (int i = 0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ highdUnif.cpp: In function 'double lossUnifHd(const arma::mat&, const arma::vec&, const arma::vec&, double, double, double)': highdUnif.cpp:11:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare] 11 | for (int i = 0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ highdUnif.cpp: In function 'double updateUnifHd(const arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, double, double, double, double)': highdUnif.cpp:24:21: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare] 24 | for (int i = 0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o conquer.so RcppExports.o defFun.o highdGauss.o highdLogistic.o highdPara.o highdTrian.o highdUnif.o lowd.o -fopenmp -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/conquer/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/conquer/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/conquer/src' installing to /data/gannet/ripley/R/packages/tests-devel/conquer.Rcheck/00LOCK-conquer/00new/conquer/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (conquer)