* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/cluster.Rcheck’ * using R Under development (unstable) (2024-04-24 r86484) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-13 (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘cluster/DESCRIPTION’ ... OK * this is package ‘cluster’ version ‘2.1.6’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘cluster’ can be installed ... [19s/28s] OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/cluster-00install.html' for details. * used C compiler: ‘gcc-13 (GCC) 13.2.0’ * used Fortran compiler: ‘GNU Fortran (GCC) 13.2.0’ * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [16s/17s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking usage of KIND in Fortran files ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [97s/118s] OK Running ‘agnes-ex.R’ Comparing ‘agnes-ex.Rout’ to ‘agnes-ex.Rout.save’ ... OK Running ‘clara-NAs.R’ Comparing ‘clara-NAs.Rout’ to ‘clara-NAs.Rout.save’ ... OK Running ‘clara-ex.R’ Comparing ‘clara-ex.Rout’ to ‘clara-ex.Rout.save’ ... OK Running ‘clara-gower.R’ Running ‘clara.R’ Comparing ‘clara.Rout’ to ‘clara.Rout.save’ ... OK Running ‘clusplot-out.R’ Comparing ‘clusplot-out.Rout’ to ‘clusplot-out.Rout.save’ ... OK Running ‘daisy-ex.R’ Comparing ‘daisy-ex.Rout’ to ‘daisy-ex.Rout.save’ ... OK Running ‘diana-boots.R’ Running ‘diana-ex.R’ Comparing ‘diana-ex.Rout’ to ‘diana-ex.Rout.save’ ... OK Running ‘ellipsoid-ex.R’ Comparing ‘ellipsoid-ex.Rout’ to ‘ellipsoid-ex.Rout.save’ ... OK Running ‘fanny-ex.R’ Comparing ‘fanny-ex.Rout’ to ‘fanny-ex.Rout.save’ ...194c194 < iterations 42 --- > iterations 45 Running ‘mona.R’ Comparing ‘mona.Rout’ to ‘mona.Rout.save’ ... OK Running ‘pam.R’ [72s/88s] Comparing ‘pam.Rout’ to ‘pam.Rout.save’ ... OK Running ‘silhouette-default.R’ Comparing ‘silhouette-default.Rout’ to ‘silhouette-default.Rout.save’ ... OK Running ‘sweep-ex.R’ * checking PDF version of manual ... [13s/20s] OK * checking HTML version of manual ... [7s/12s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: OK