* installing *source* package ‘clinfun’ ... ** package ‘clinfun’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (GCC) 13.2.0’ using Fortran compiler: ‘GNU Fortran (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/clinfun/src' gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c calogrank.f -o calogrank.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c coxphCPE.f -o coxphCPE.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c coxphCPEt.f -o coxphCPEt.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c deltaAUC.f -o deltaAUC.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fdnorm.c -o fdnorm.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fdwilcox.c -o fdwilcox.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c fedesign.f -o fedesign.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fpnorm.c -o fpnorm.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c jonckheere.f -o jonckheere.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c jtpdf.f -o jtpdf.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c ktau.f -o ktau.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c lehmann.f -o lehmann.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c lrtest.f -o lrtest.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c ph2simon.f -o ph2simon.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c rocarea.f -o rocarea.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c roccurve.f -o roccurve.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c rshared.c -o rshared.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c stratperm.f -o stratperm.o gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o clinfun.so calogrank.o coxphCPE.o coxphCPEt.o deltaAUC.o fdnorm.o fdwilcox.o fedesign.o fpnorm.o init.o jonckheere.o jtpdf.o ktau.o lehmann.o lrtest.o ph2simon.o rocarea.o roccurve.o rshared.o stratperm.o -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/clinfun/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/clinfun/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/clinfun/src' installing to /data/gannet/ripley/R/packages/tests-devel/clinfun.Rcheck/00LOCK-clinfun/00new/clinfun/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (clinfun)