* installing *source* package ‘bvartools’ ... ** package ‘bvartools’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bvartools/src' g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bvaralg.cpp -o bvaralg.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bvartvpalg.cpp -o bvartvpalg.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bvecalg.cpp -o bvecalg.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bvectvpalg.cpp -o bvectvpalg.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bvs.cpp -o bvs.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c dfmalg.cpp -o dfmalg.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c draw_forecast.cpp -o draw_forecast.o bvaralg.cpp: In function 'Rcpp::List bvaralg(Rcpp::List)': bvaralg.cpp:408:29: warning: 'psi_varsel_n' may be used uninitialized [-Wmaybe-uninitialized] 408 | for (int i = 0; i < psi_varsel_n; i++){ | ~~^~~~~~~~~~~~~~ bvaralg.cpp:153:7: note: 'psi_varsel_n' was declared here 153 | int psi_varsel_n, psi_varsel_pos; | ^~~~~~~~~~~~ In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:761, from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29, from ../inst/include/bvartools_RcppExports.h:7, from ../inst/include/bvartools.h:7, from bvaralg.cpp:1: In static member function 'static bool arma::op_wishrnd::apply_noalias_mode1(arma::Mat&, const arma::Mat&, eT) [with eT = double]', inlined from 'static bool arma::op_wishrnd::apply_direct(arma::Mat&, const arma::Base&, typename T1::elem_type, arma::uword) [with T1 = arma::Glue, arma::Glue, arma::Op, arma::op_htrans>, arma::glue_times>, arma::eglue_plus>, arma::Mat, arma::glue_solve_gen_default>]' at /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/op_wishrnd_meat.hpp:76:62, inlined from 'static void arma::op_wishrnd::apply(arma::Mat&, const arma::Op&) [with T1 = arma::Glue, arma::Glue, arma::Op, arma::op_htrans>, arma::glue_times>, arma::eglue_plus>, arma::Mat, arma::glue_solve_gen_default>]' at /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/op_wishrnd_meat.hpp:41:47, inlined from 'arma::Mat& arma::Mat::operator=(const arma::Op&) [with T1 = arma::Glue, arma::Glue, arma::Op, arma::op_htrans>, arma::glue_times>, arma::eglue_plus>, arma::Mat, arma::glue_solve_gen_default>; op_type = arma::op_wishrnd; eT = double]' at /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/Mat_meat.hpp:4961:17, inlined from 'Rcpp::List bvaralg(Rcpp::List)' at bvaralg.cpp:511:98: /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/op_wishrnd_meat.hpp:104:41: warning: 'sigma_post_df' may be used uninitialized [-Wmaybe-uninitialized] 104 | return op_wishrnd::apply_noalias_mode2(out, D, df); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ bvaralg.cpp: In function 'Rcpp::List bvaralg(Rcpp::List)': bvaralg.cpp:210:10: note: 'sigma_post_df' was declared here 210 | double sigma_post_df; | ^~~~~~~~~~~~~ bvartvpalg.cpp: In function 'Rcpp::List bvartvpalg(Rcpp::List)': bvartvpalg.cpp:373:27: warning: 'psi_varsel_n' may be used uninitialized [-Wmaybe-uninitialized] 373 | for (int j = 0; j < psi_varsel_n; j++){ | ~~^~~~~~~~~~~~~~ bvartvpalg.cpp:160:7: note: 'psi_varsel_n' was declared here 160 | int psi_varsel_n, psi_varsel_pos; | ^~~~~~~~~~~~ In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:618, from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29, from ../inst/include/bvartools_RcppExports.h:7, from ../inst/include/bvartools.h:7, from bvartvpalg.cpp:4: In constructor 'arma::Op::Op(const T1&, typename T1::elem_type, arma::uword, arma::uword) [with T1 = arma::Glue, arma::Glue, arma::Op, arma::op_htrans>, arma::glue_times>, arma::eglue_plus>, arma::Mat, arma::glue_solve_gen_default>; op_type = arma::op_wishrnd]', inlined from 'typename arma::enable_if2::value, const arma::Op >::result arma::wishrnd(const Base&, typename T1::elem_type) [with T1 = Glue, Glue, Op, op_htrans>, glue_times>, eglue_plus>, Mat, glue_solve_gen_default>]' at /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/fn_wishrnd.hpp:37:64, inlined from 'Rcpp::List bvartvpalg(Rcpp::List)' at bvartvpalg.cpp:461:34: /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/Op_meat.hpp:49:5: warning: 'sigma_post_df' may be used uninitialized [-Wmaybe-uninitialized] 49 | , aux(in_aux) | ^~~~~~~~~~~ bvartvpalg.cpp: In function 'Rcpp::List bvartvpalg(Rcpp::List)': bvartvpalg.cpp:191:10: note: 'sigma_post_df' was declared here 191 | double sigma_post_df; | ^~~~~~~~~~~~~ In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:634, from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29, from ../inst/include/bvartools_RcppExports.h:7, from ../inst/include/bvartools.h:7, from bvecalg.cpp:1: In constructor 'arma::eOp::eOp(const T1&, typename T1::elem_type) [with T1 = arma::Glue, arma::op_htrans>, arma::Mat, arma::glue_times>, arma::Mat, arma::glue_times>; eop_type = arma::eop_scalar_times]', inlined from 'typename arma::enable_if2::value, const arma::eOp >::result arma::operator*(typename T1::elem_type, const T1&) [with T1 = Glue, op_htrans>, Mat, glue_times>, Mat, glue_times>]' at /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/operator_times.hpp:47:39, inlined from 'Rcpp::List bvecalg(Rcpp::List)' at bvecalg.cpp:404:84: /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/eOp_meat.hpp:38:5: warning: 'coint_v_i' may be used uninitialized [-Wmaybe-uninitialized] 38 | , aux(in_aux) | ^~~~~~~~~~~ bvecalg.cpp: In function 'Rcpp::List bvecalg(Rcpp::List)': bvecalg.cpp:132:10: note: 'coint_v_i' was declared here 132 | double coint_v_i; | ^~~~~~~~~ In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:761: In static member function 'static bool arma::op_wishrnd::apply_direct(arma::Mat&, const arma::Base&, typename T1::elem_type, arma::uword) [with T1 = arma::Glue, arma::Glue, arma::Op, arma::op_htrans>, arma::glue_times>, arma::eglue_plus>, arma::Mat, arma::glue_solve_gen_default>]', inlined from 'static void arma::op_wishrnd::apply(arma::Mat&, const arma::Op&) [with T1 = arma::Glue, arma::Glue, arma::Op, arma::op_htrans>, arma::glue_times>, arma::eglue_plus>, arma::Mat, arma::glue_solve_gen_default>]' at /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/op_wishrnd_meat.hpp:41:47, inlined from 'arma::Mat& arma::Mat::operator=(const arma::Op&) [with T1 = arma::Glue, arma::Glue, arma::Op, arma::op_htrans>, arma::glue_times>, arma::eglue_plus>, arma::Mat, arma::glue_solve_gen_default>; op_type = arma::op_wishrnd; eT = double]' at /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/Mat_meat.hpp:4961:17, inlined from 'Rcpp::List bvecalg(Rcpp::List)' at bvecalg.cpp:648:100: /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/op_wishrnd_meat.hpp:76:62: warning: 'sigma_post_df' may be used uninitialized [-Wmaybe-uninitialized] 76 | if(mode == 1) { status = op_wishrnd::apply_noalias_mode1(out, U.M, df); } | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ bvecalg.cpp: In function 'Rcpp::List bvecalg(Rcpp::List)': bvecalg.cpp:248:10: note: 'sigma_post_df' was declared here 248 | double sigma_post_df; | ^~~~~~~~~~~~~ bvecalg.cpp:432:27: warning: 'a_varsel_n' may be used uninitialized [-Wmaybe-uninitialized] 432 | for (int i = 0; i < a_varsel_n; i++){ | ~~^~~~~~~~~~~~ bvecalg.cpp:275:7: note: 'a_varsel_n' was declared here 275 | int a_varsel_n, a_varsel_pos; | ^~~~~~~~~~ bvecalg.cpp:543:29: warning: 'psi_varsel_n' may be used uninitialized [-Wmaybe-uninitialized] 543 | for (int i = 0; i < psi_varsel_n; i++){ | ~~^~~~~~~~~~~~~~ bvecalg.cpp:296:7: note: 'psi_varsel_n' was declared here 296 | int psi_varsel_n, psi_varsel_pos; | ^~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c ir.cpp -o ir.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c kalman_dk.cpp -o kalman_dk.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c loglik_normal.cpp -o loglik_normal.o bvectvpalg.cpp: In function 'Rcpp::List bvectvpalg(Rcpp::List)': bvectvpalg.cpp:488:78: warning: 'rho' may be used uninitialized [-Wmaybe-uninitialized] 488 | prior_gamma_vinv.submat(0, 0, n_alpha - 1, n_alpha - 1) = 1 / (1 - rho * rho) * arma::eye(n_alpha, n_alpha); | ~~~~^~~~~ bvectvpalg.cpp:117:10: note: 'rho' was declared here 117 | double rho; | ^~~ bvectvpalg.cpp:448:25: warning: 'gamma_varsel_n' may be used uninitialized [-Wmaybe-uninitialized] 448 | for (int j = 0; j < gamma_varsel_n; j++){ | ~~^~~~~~~~~~~~~~~~ bvectvpalg.cpp:240:7: note: 'gamma_varsel_n' was declared here 240 | int gamma_varsel_n, gamma_varsel_pos; | ^~~~~~~~~~~~~~ bvectvpalg.cpp:577:27: warning: 'psi_varsel_n' may be used uninitialized [-Wmaybe-uninitialized] 577 | for (int j = 0; j < psi_varsel_n; j++){ | ~~^~~~~~~~~~~~~~ bvectvpalg.cpp:278:7: note: 'psi_varsel_n' was declared here 278 | int psi_varsel_n, psi_varsel_pos; | ^~~~~~~~~~~~ In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:618, from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29, from ../inst/include/bvartools_RcppExports.h:7, from ../inst/include/bvartools.h:7, from bvectvpalg.cpp:4: In constructor 'arma::Op::Op(const T1&, typename T1::elem_type, arma::uword, arma::uword) [with T1 = arma::Glue, arma::Glue, arma::Op, arma::op_htrans>, arma::glue_times>, arma::eglue_plus>, arma::Mat, arma::glue_solve_gen_default>; op_type = arma::op_wishrnd]', inlined from 'typename arma::enable_if2::value, const arma::Op >::result arma::wishrnd(const Base&, typename T1::elem_type) [with T1 = Glue, Glue, Op, op_htrans>, glue_times>, eglue_plus>, Mat, glue_solve_gen_default>]' at /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/fn_wishrnd.hpp:37:64, inlined from 'Rcpp::List bvectvpalg(Rcpp::List)' at bvectvpalg.cpp:680:34: /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/Op_meat.hpp:49:5: warning: 'sigma_post_df' may be used uninitialized [-Wmaybe-uninitialized] 49 | , aux(in_aux) | ^~~~~~~~~~~ bvectvpalg.cpp: In function 'Rcpp::List bvectvpalg(Rcpp::List)': bvectvpalg.cpp:310:10: note: 'sigma_post_df' was declared here 310 | double sigma_post_df; | ^~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c post_coint_kls.cpp -o post_coint_kls.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c post_coint_kls_sur.cpp -o post_coint_kls_sur.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c post_normal.cpp -o post_normal.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c post_normal_sur.cpp -o post_normal_sur.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c prep_covar_data.cpp -o prep_covar_data.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c stoch_vol.cpp -o stoch_vol.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c stochvol_ksc1998.cpp -o stochvol_ksc1998.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c stochvol_ocsn2007.cpp -o stochvol_ocsn2007.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c svss.cpp -o svss.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DARMA_NO_DEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c vardecomp.cpp -o vardecomp.o g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o bvartools.so RcppExports.o bvaralg.o bvartvpalg.o bvecalg.o bvectvpalg.o bvs.o dfmalg.o draw_forecast.o ir.o kalman_dk.o loglik_normal.o post_coint_kls.o post_coint_kls_sur.o post_normal.o post_normal_sur.o prep_covar_data.o stoch_vol.o stochvol_ksc1998.o stochvol_ocsn2007.o svss.o vardecomp.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bvartools/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bvartools/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bvartools/src' installing to /data/gannet/ripley/R/packages/tests-devel/bvartools.Rcheck/00LOCK-bvartools/00new/bvartools/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bvartools)