* installing *source* package ‘bfp’ ... ** package ‘bfp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (GCC) 13.2.0’ using C++ compiler: ‘g++-13 (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bfp/src' gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -D R_NO_REMAP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c hyp2f1.c -o hyp2f1.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -D R_NO_REMAP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mtherr.c -o mtherr.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -D R_NO_REMAP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Inewmat -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bayesMfp.cpp -o bayesMfp.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -D R_NO_REMAP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Inewmat -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c dataStructure.cpp -o dataStructure.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -D R_NO_REMAP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Inewmat -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c hyperg.cpp -o hyperg.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -D R_NO_REMAP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Inewmat -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c combinatorics.cpp -o combinatorics.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -D R_NO_REMAP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Inewmat -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RnewMat.cpp -o RnewMat.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -D R_NO_REMAP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -Inewmat -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c conversions.cpp -o conversions.o rm: cannot remove '*.a': No such file or directory make[1]: [Makevars:31: subclean] Error 1 (ignored) (cd newmat && MkInclude="/data/gannet/ripley/R/R-devel/etc/Makeconf" make clean) || exit 1; make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bfp/src/newmat' rm -f -r .libs _libs libnewmat.a rm -f newmat1.o newmat2.o newmat3.o newmat4.o newmat5.o newmat6.o newmat7.o newmat8.o newmatex.o bandmat.o submat.o myexcept.o cholesky.o evalue.o fft.o hholder.o jacobi.o newfft.o sort.o svd.o nm_misc.o newmatrm.o newmat9.o make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bfp/src/newmat' (cd newmat && CFLAGS="-g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes " CXXFLAGS="-g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection " MAKE="make -f \"/data/gannet/ripley/R/R-devel/etc/Makeconf\" -f Makefile" make -f "/data/gannet/ripley/R/R-devel/etc/Makeconf" -f Makefile library) || exit 1; make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bfp/src/newmat' g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c newmat1.cpp -o newmat1.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c newmat2.cpp -o newmat2.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c newmat3.cpp -o newmat3.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c newmat4.cpp -o newmat4.o In file included from /data/gannet/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30, from rcppExport.h:11, from dataStructure.h:11, from RnewMat.cpp:2: /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:26: warning: "R_NO_REMAP" redefined 26 | #define R_NO_REMAP | : note: this is the location of the previous definition In file included from /data/gannet/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30, from rcppExport.h:11, from dataStructure.h:11, from bayesMfp.cpp:4: /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:26: warning: "R_NO_REMAP" redefined 26 | #define R_NO_REMAP | : note: this is the location of the previous definition In file included from /data/gannet/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30, from rcppExport.h:11, from dataStructure.h:11, from dataStructure.cpp:1: /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:26: warning: "R_NO_REMAP" redefined 26 | #define R_NO_REMAP | : note: this is the location of the previous definition newmat3.cpp: In member function 'virtual void SymmetricBandMatrix::GetRow(MatrixRowCol&)': newmat3.cpp:670:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 670 | if (s>0) w -= s; mrc.storage = w; int w2 = w-w1; | ^~ newmat3.cpp:670:24: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 670 | if (s>0) w -= s; mrc.storage = w; int w2 = w-w1; | ^~~ newmat3.cpp: In member function 'virtual void SymmetricBandMatrix::GetCol(MatrixRowCol&)': newmat3.cpp:711:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 711 | if (s>0) w -= s; mrc.storage = w; int w2 = w-w1; | ^~ newmat3.cpp:711:24: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 711 | if (s>0) w -= s; mrc.storage = w; int w2 = w-w1; | ^~~ newmat3.cpp: In member function 'virtual void SymmetricBandMatrix::GetCol(MatrixColX&)': newmat3.cpp:761:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 761 | if (s>0) w -= s; mrc.storage = w; int w2 = w-w1; | ^~ newmat3.cpp:761:24: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 761 | if (s>0) w -= s; mrc.storage = w; int w2 = w-w1; | ^~~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c newmat5.cpp -o newmat5.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c newmat6.cpp -o newmat6.o newmat2.cpp: In member function 'void MatrixRowCol::Add(const MatrixRowCol&)': newmat2.cpp:41:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 41 | if (f < skip) f = skip; if (l > lx) l = lx; l -= f; | ^~ newmat2.cpp:41:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 41 | if (f < skip) f = skip; if (l > lx) l = lx; l -= f; | ^~ newmat2.cpp: In member function 'void MatrixRowCol::AddScaled(const MatrixRowCol&, Real)': newmat2.cpp:52:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 52 | if (f < skip) f = skip; if (l > lx) l = lx; l -= f; | ^~ newmat2.cpp:52:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 52 | if (f < skip) f = skip; if (l > lx) l = lx; l -= f; | ^~ newmat2.cpp: In member function 'void MatrixRowCol::Sub(const MatrixRowCol&)': newmat2.cpp:63:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 63 | if (f < skip) f = skip; if (l > lx) l = lx; l -= f; | ^~ newmat2.cpp:63:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 63 | if (f < skip) f = skip; if (l > lx) l = lx; l -= f; | ^~ newmat2.cpp: In member function 'void MatrixRowCol::Inject(const MatrixRowCol&)': newmat2.cpp:74:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 74 | if (f < skip) f = skip; if (l > lx) l = lx; l -= f; | ^~ newmat2.cpp:74:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 74 | if (f < skip) f = skip; if (l > lx) l = lx; l -= f; | ^~ newmat2.cpp: In function 'Real DotProd(const MatrixRowCol&, const MatrixRowCol&)': newmat2.cpp:85:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 85 | if (f < f2) f = f2; if (l > l2) l = l2; l -= f; | ^~ newmat2.cpp:85:24: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 85 | if (f < f2) f = f2; if (l > l2) l = l2; l -= f; | ^~ newmat2.cpp: In member function 'void MatrixRowCol::Add(const MatrixRowCol&, const MatrixRowCol&)': newmat2.cpp:99:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 99 | if (f1l) l1=l; | ^~ newmat2.cpp:99:20: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 99 | if (f1l) l1=l; | ^~ newmat2.cpp:101:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 101 | if (f2l) l2=l; | ^~ newmat2.cpp:101:20: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 101 | if (f2l) l2=l; | ^~ newmat2.cpp: In member function 'void MatrixRowCol::Sub(const MatrixRowCol&, const MatrixRowCol&)': newmat2.cpp:171:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 171 | if (f1l) l1=l; | ^~ newmat2.cpp:171:20: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 171 | if (f1l) l1=l; | ^~ newmat2.cpp:173:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 173 | if (f2l) l2=l; | ^~ newmat2.cpp:173:20: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 173 | if (f2l) l2=l; | ^~ newmat2.cpp: In member function 'void MatrixRowCol::Multiply(const MatrixRowCol&, const MatrixRowCol&)': newmat2.cpp:335:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 335 | if (f1l) l1=l; | ^~ newmat2.cpp:335:20: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 335 | if (f1l) l1=l; | ^~ newmat2.cpp:337:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 337 | if (f2l) l2=l; | ^~ newmat2.cpp:337:20: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 337 | if (f2l) l2=l; | ^~ newmat2.cpp:339:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 339 | if (f1l2) l1 = l2; | ^~ newmat2.cpp:339:24: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 339 | if (f1l2) l1 = l2; | ^~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c newmat7.cpp -o newmat7.o newmat7.cpp: In member function 'virtual GeneralMatrix* AddedMatrix::Evaluate(MatrixType)': newmat7.cpp:554:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 554 | if (!c1) gm1->tDelete(); if (!c2) gm2->tDelete(); | ^~ newmat7.cpp:554:38: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 554 | if (!c1) gm1->tDelete(); if (!c2) gm2->tDelete(); | ^~ newmat7.cpp:558:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 558 | if (!c1) gm1->tDelete(); if (!c2) gm2->tDelete(); | ^~ newmat7.cpp:558:35: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 558 | if (!c1) gm1->tDelete(); if (!c2) gm2->tDelete(); | ^~ newmat7.cpp: In member function 'virtual GeneralMatrix* SubtractedMatrix::Evaluate(MatrixType)': newmat7.cpp:618:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 618 | if (!c1) gm1->tDelete(); gmx = gm2; | ^~ newmat7.cpp:618:35: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 618 | if (!c1) gm1->tDelete(); gmx = gm2; | ^~~ newmat7.cpp:627:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 627 | if (!c1) gm1->tDelete(); if (!c2) gm2->tDelete(); | ^~ newmat7.cpp:627:38: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 627 | if (!c1) gm1->tDelete(); if (!c2) gm2->tDelete(); | ^~ newmat7.cpp:631:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 631 | if (!c1) gm1->tDelete(); if (!c2) gm2->tDelete(); | ^~ newmat7.cpp:631:35: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 631 | if (!c1) gm1->tDelete(); if (!c2) gm2->tDelete(); | ^~ newmat7.cpp: In member function 'virtual GeneralMatrix* SPMatrix::Evaluate(MatrixType)': newmat7.cpp:697:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 697 | if (!c1) gm1->tDelete(); if (!c2) gm2->tDelete(); | ^~ newmat7.cpp:697:38: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 697 | if (!c1) gm1->tDelete(); if (!c2) gm2->tDelete(); | ^~ newmat7.cpp:701:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 701 | if (!c1) gm1->tDelete(); if (!c2) gm2->tDelete(); | ^~ newmat7.cpp:701:35: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 701 | if (!c1) gm1->tDelete(); if (!c2) gm2->tDelete(); | ^~ newmat7.cpp: In function 'bool RealEqual(Real*, Real*, int)': newmat7.cpp:781:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 781 | if (*s1++ != *s2++) return false; if (*s1++ != *s2++) return false; | ^~ newmat7.cpp:781:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 781 | if (*s1++ != *s2++) return false; if (*s1++ != *s2++) return false; | ^~ newmat7.cpp:782:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 782 | if (*s1++ != *s2++) return false; if (*s1++ != *s2++) return false; | ^~ newmat7.cpp:782:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 782 | if (*s1++ != *s2++) return false; if (*s1++ != *s2++) return false; | ^~ newmat7.cpp: In function 'bool intEqual(int*, int*, int)': newmat7.cpp:793:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 793 | if (*s1++ != *s2++) return false; if (*s1++ != *s2++) return false; | ^~ newmat7.cpp:793:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 793 | if (*s1++ != *s2++) return false; if (*s1++ != *s2++) return false; | ^~ newmat7.cpp:794:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 794 | if (*s1++ != *s2++) return false; if (*s1++ != *s2++) return false; | ^~ newmat7.cpp:794:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 794 | if (*s1++ != *s2++) return false; if (*s1++ != *s2++) return false; | ^~ newmat7.cpp: In member function 'bool GeneralMatrix::is_zero() const': newmat7.cpp:871:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 871 | if (*s++) return false; if (*s++) return false; | ^~ newmat7.cpp:871:31: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 871 | if (*s++) return false; if (*s++) return false; | ^~ newmat7.cpp:872:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 872 | if (*s++) return false; if (*s++) return false; | ^~ newmat7.cpp:872:31: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 872 | if (*s++) return false; if (*s++) return false; | ^~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c newmat8.cpp -o newmat8.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c newmatex.cpp -o newmatex.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bandmat.cpp -o bandmat.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c submat.cpp -o submat.o newmat8.cpp: In member function 'virtual LogAndSign CroutMatrix::log_determinant() const': newmat8.cpp:715:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 715 | if (!d) sum.ChangeSign(); return sum; | ^~ newmat8.cpp:715:30: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 715 | if (!d) sum.ChangeSign(); return sum; | ^~~~~~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c myexcept.cpp -o myexcept.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cholesky.cpp -o cholesky.o bandmat.cpp: In member function 'virtual LogAndSign BandLUMatrix::log_determinant() const': bandmat.cpp:362:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 362 | if (!d) sum.ChangeSign(); return sum; | ^~ bandmat.cpp:362:30: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 362 | if (!d) sum.ChangeSign(); return sum; | ^~~~~~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c evalue.cpp -o evalue.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c fft.cpp -o fft.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c hholder.cpp -o hholder.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c jacobi.cpp -o jacobi.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c newfft.cpp -o newfft.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c sort.cpp -o sort.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c svd.cpp -o svd.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c nm_misc.cpp -o nm_misc.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c newmatrm.cpp -o newmatrm.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c newmat9.cpp -o newmat9.o gcc-ar -rucs libnewmat.a newmat1.o newmat2.o newmat3.o newmat4.o newmat5.o newmat6.o newmat7.o newmat8.o newmatex.o bandmat.o submat.o myexcept.o cholesky.o evalue.o fft.o hholder.o jacobi.o newfft.o sort.o svd.o nm_misc.o newmatrm.o newmat9.o make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bfp/src/newmat' g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o bfp.so hyp2f1.o mtherr.o bayesMfp.o dataStructure.o hyperg.o combinatorics.o RnewMat.o conversions.o -Lnewmat -lnewmat make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bfp/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bfp/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bfp/src' installing to /data/gannet/ripley/R/packages/tests-devel/bfp.Rcheck/00LOCK-bfp/00new/bfp/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bfp)