* installing *source* package ‘SuperGauss’ ...
** package ‘SuperGauss’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... gcc-13
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc-13 accepts -g... yes
checking for gcc-13 option to accept ISO C89... none needed
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for FFTW... yes
configure: creating ./config.status
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/SuperGauss/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include   -I../inst/include -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c CirculantExports.cpp -o CirculantExports.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include   -I../inst/include -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c DurbinLevinsonExports.cpp -o DurbinLevinsonExports.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include   -I../inst/include -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c FFTExports.cpp -o FFTExports.o
In file included from FFTExports.cpp:8:
In destructor 'EvenFFT::~EvenFFT()',
    inlined from 'EvenFFT::~EvenFFT()' at ../inst/include/SuperGauss/EvenFFT.h:70:8,
    inlined from 'Rcpp::NumericVector even_fft(Rcpp::NumericVector, bool)' at FFTExports.cpp:76:1:
../inst/include/SuperGauss/EvenFFT.h:74:22: warning: 'efft.EvenFFT::planeven_' may be used uninitialized [-Wmaybe-uninitialized]
   74 |     fftw_destroy_plan(planeven_);
      |     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~
FFTExports.cpp: In function 'Rcpp::NumericVector even_fft(Rcpp::NumericVector, bool)':
FFTExports.cpp:67:11: note: 'efft.EvenFFT::planeven_' was declared here
   67 |   EvenFFT efft(N);
      |           ^~~~
In member function 'void EvenFFT::fft(double*, const double*)',
    inlined from 'void EvenFFT::ifft(double*, const double*)' at ../inst/include/SuperGauss/EvenFFT.h:105:6,
    inlined from 'Rcpp::NumericVector even_fft(Rcpp::NumericVector, bool)' at FFTExports.cpp:73:14:
../inst/include/SuperGauss/EvenFFT.h:92:17: warning: 'efft.EvenFFT::planodd_' may be used uninitialized [-Wmaybe-uninitialized]
   92 |     fftw_execute(planodd_);
      |     ~~~~~~~~~~~~^~~~~~~~~~
FFTExports.cpp: In function 'Rcpp::NumericVector even_fft(Rcpp::NumericVector, bool)':
FFTExports.cpp:67:11: note: 'efft.EvenFFT::planodd_' was declared here
   67 |   EvenFFT efft(N);
      |           ^~~~
In destructor 'EvenFFT::~EvenFFT()',
    inlined from 'EvenFFT::~EvenFFT()' at ../inst/include/SuperGauss/EvenFFT.h:70:8,
    inlined from 'Rcpp::NumericVector even_fft(Rcpp::NumericVector, bool)' at FFTExports.cpp:76:1:
../inst/include/SuperGauss/EvenFFT.h:73:14: warning: 'efft.EvenFFT::yeven_' may be used uninitialized [-Wmaybe-uninitialized]
   73 |     fftw_free(yeven_);
      |     ~~~~~~~~~^~~~~~~~
FFTExports.cpp: In function 'Rcpp::NumericVector even_fft(Rcpp::NumericVector, bool)':
FFTExports.cpp:67:11: note: 'efft.EvenFFT::yeven_' was declared here
   67 |   EvenFFT efft(N);
      |           ^~~~
FFTExports.cpp:67:11: warning: 'efft.EvenFFT::yodd_' may be used uninitialized [-Wmaybe-uninitialized]
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include   -I../inst/include -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c NormalCirculantExports.cpp -o NormalCirculantExports.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include   -I../inst/include -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c NormalToeplitzExports.cpp -o NormalToeplitzExports.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include   -I../inst/include -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c PCGExports.cpp -o PCGExports.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include   -I../inst/include -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include   -I../inst/include -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c ToeplitzExports.cpp -o ToeplitzExports.o
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o SuperGauss.so CirculantExports.o DurbinLevinsonExports.o FFTExports.o NormalCirculantExports.o NormalToeplitzExports.o PCGExports.o RcppExports.o ToeplitzExports.o -lfftw3
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/SuperGauss/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/SuperGauss/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/SuperGauss/src'
installing to /data/gannet/ripley/R/packages/tests-devel/SuperGauss.Rcheck/00LOCK-SuperGauss/00new/SuperGauss/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for ‘ncol’ from package ‘base’ in package ‘SuperGauss’
Creating a generic function for ‘nrow’ from package ‘base’ in package ‘SuperGauss’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SuperGauss)