* installing *source* package ‘SGL’ ...
** package ‘SGL’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/SGL/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c Coxfit.cpp -o Coxfit.o
Coxfit.cpp: In function 'void VCalc(int*, int*, int*, int*, int*, double*, double*)':
Coxfit.cpp:16:10: warning: unused variable 'w' [-Wunused-variable]
   16 |   double w;
      |          ^
Coxfit.cpp:17:10: warning: unused variable 'r' [-Wunused-variable]
   17 |   double r;
      |          ^
Coxfit.cpp: In function 'void gradCalc(int*, int*, int*, int*, int*, int*, int*, double*, double*, double*)':
Coxfit.cpp:56:10: warning: unused variable 'r' [-Wunused-variable]
   56 |   double r;
      |          ^
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o SGL.so Coxfit.o registerDynamicSymbol.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/SGL/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/SGL/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/SGL/src'
installing to /data/gannet/ripley/R/packages/tests-devel/SGL.Rcheck/00LOCK-SGL/00new/SGL/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SGL)