* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/SEIRfansy.Rcheck’
* using R Under development (unstable) (2024-04-05 r86344)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc-13 (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘SEIRfansy/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘SEIRfansy’ version ‘1.1.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘SEIRfansy’ can be installed ... [21s/25s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/SEIRfansy-00install.html' for details.
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘knitr’
  All declared Imports should be used.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [28s/35s] OK
* checking Rd files ... NOTE
checkRd: (-1) SEIRfansy.Rd:61-63: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:64-71: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:72-77: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:78-83: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:84-88: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:89-93: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:94-99: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:100-102: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:103-105: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:106-107: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:108: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:109-110: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:111-112: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:113-115: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:116-118: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:119-120: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:121-123: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:124-126: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:127-128: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.Rd:135: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SEIRfansy.Rd:136: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SEIRfansy.predict.Rd:75-76: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:77-78: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:79-81: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:82-89: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:90-95: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:96-100: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:101-106: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:107-111: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:112-116: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:117-119: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:120-122: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:123: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:124-125: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:126-127: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:128-130: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:131-134: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:135-136: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:137-139: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:140-142: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:143-144: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SEIRfansy.predict.Rd:151: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SEIRfansy.predict.Rd:152: Lost braces in \itemize; \value handles \item{}{} directly
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... [7s/12s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 2 NOTEs