* installing *source* package ‘RoBSA’ ...
** package ‘RoBSA’ successfully unpacked and MD5 sums checked
** using staged installation
checking for pkg-config... /usr/bin/pkg-config
configure: Setting compile and link flags according to pkg-config
configure: Compile flags are -I/usr/local/include/JAGS 
configure: Link flags are -L/usr/local/lib64 -ljags  -ljrmath
checking for gcc... gcc-13
checking whether we are using the GNU C compiler... no
checking whether gcc-13 accepts -g... no
checking for gcc-13 option to accept ISO C89... unsupported
checking for jags_version in -ljags... yes
checking version of JAGS library... OK
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/RoBSA/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c functions/exp.cc -o functions/exp.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c functions/gamma.cc -o functions/gamma.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c functions/llogis.cc -o functions/llogis.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c functions/lnorm.cc -o functions/lnorm.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c functions/weibull.cc -o functions/weibull.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c distributions/EXP.cc -o distributions/EXP.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c distributions/GAMMA.cc -o distributions/GAMMA.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c distributions/LLOGIS.cc -o distributions/LLOGIS.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c distributions/LNORM.cc -o distributions/LNORM.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c distributions/WEIBULL.cc -o distributions/WEIBULL.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c source/distributions.cc -o source/distributions.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c init.c -o init.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RoBSA.cc -o RoBSA.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c testRoBSA.cc -o testRoBSA.o
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o RoBSA.so functions/exp.o functions/gamma.o functions/llogis.o functions/lnorm.o functions/weibull.o distributions/EXP.o distributions/GAMMA.o distributions/LLOGIS.o distributions/LNORM.o distributions/WEIBULL.o source/distributions.o init.o RoBSA.o testRoBSA.o -L/usr/local/lib64 -ljags -ljrmath -ljrmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/RoBSA/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/RoBSA/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/RoBSA/src'
installing to /data/gannet/ripley/R/packages/tests-devel/RoBSA.Rcheck/00LOCK-RoBSA/00new/RoBSA/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RoBSA)