* installing *source* package ‘Rlibkdv’ ... ** package ‘Rlibkdv’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/Rlibkdv/src' g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c EDWIN_multiple.cpp -o EDWIN_multiple.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c EDWIN_otf.cpp -o EDWIN_otf.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c SLAM.cpp -o SLAM.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c SWS.cpp -o SWS.o SWS.cpp: In function 'double compute_init_window_density(statistics&, SWS&, win_status&)': SWS.cpp:151:16: warning: 'win_density_value' may be used uninitialized [-Wmaybe-uninitialized] 151 | return win_density_value; | ^~~~~~~~~~~~~~~~~ SWS.cpp:59:16: note: 'win_density_value' was declared here 59 | double win_density_value; | ^~~~~~~~~~~~~~~~~ In file included from /usr/local/gcc13/include/c++/13.2.0/x86_64-pc-linux-gnu/bits/c++allocator.h:33, from /usr/local/gcc13/include/c++/13.2.0/bits/allocator.h:46, from /usr/local/gcc13/include/c++/13.2.0/string:43, from /usr/local/gcc13/include/c++/13.2.0/bits/locale_classes.h:40, from /usr/local/gcc13/include/c++/13.2.0/bits/ios_base.h:41, from /usr/local/gcc13/include/c++/13.2.0/ios:44, from /usr/local/gcc13/include/c++/13.2.0/ostream:40, from /usr/local/gcc13/include/c++/13.2.0/iostream:41, from Library.h:5, from init_visual.h:5, from baseline.h:5, from SWS.h:6, from SWS.cpp:1: In member function 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = SWS; _Args = {const SWS&}; _Tp = SWS]', inlined from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = SWS; _Args = {const SWS&}; _Tp = SWS]' at /usr/local/gcc13/include/c++/13.2.0/bits/alloc_traits.h:537:17, inlined from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = SWS; _Alloc = std::allocator]' at /usr/local/gcc13/include/c++/13.2.0/bits/stl_vector.h:1283:30, inlined from 'void init_SWS(statistics&)' at SWS.cpp:41:25: /usr/local/gcc13/include/c++/13.2.0/bits/new_allocator.h:187:11: warning: 'temp_SWS_obj' may be used uninitialized [-Wmaybe-uninitialized] 187 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SWS.cpp: In function 'void init_SWS(statistics&)': SWS.cpp:15:13: note: 'temp_SWS_obj' declared here 15 | SWS temp_SWS_obj; | ^~~~~~~~~~~~ In file included from /usr/local/gcc13/include/c++/13.2.0/vector:66, from Library.h:9: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = SWS; _Alloc = std::allocator]', inlined from 'void init_SWS(statistics&)' at SWS.cpp:41:25: /usr/local/gcc13/include/c++/13.2.0/bits/stl_vector.h:1289:28: warning: 'temp_SWS_obj' may be used uninitialized [-Wmaybe-uninitialized] 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/local/gcc13/include/c++/13.2.0/vector:72: /usr/local/gcc13/include/c++/13.2.0/bits/vector.tcc: In function 'void init_SWS(statistics&)': /usr/local/gcc13/include/c++/13.2.0/bits/vector.tcc:445:7: note: by argument 3 of type 'const SWS&' to 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const SWS&}; _Tp = SWS; _Alloc = std::allocator]' declared here 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ SWS.cpp:15:13: note: 'temp_SWS_obj' declared here 15 | SWS temp_SWS_obj; | ^~~~~~~~~~~~ SWS.cpp: In function 'double incr_update_window_density(statistics&, SWS&, win_status&)': SWS.cpp:271:16: warning: 'win_density_value' may be used uninitialized [-Wmaybe-uninitialized] 271 | return win_density_value; | ^~~~~~~~~~~~~~~~~ SWS.cpp:197:16: note: 'win_density_value' was declared here 197 | double win_density_value; | ^~~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c alg_visual.cpp -o alg_visual.o alg_visual.cpp: In member function 'void alg_visual::output_File()': alg_visual.cpp:514:16: warning: variable 'x' set but not used [-Wunused-but-set-variable] 514 | double x, y, time; | ^ alg_visual.cpp:514:19: warning: variable 'y' set but not used [-Wunused-but-set-variable] 514 | double x, y, time; | ^ alg_visual.cpp:514:22: warning: variable 'time' set but not used [-Wunused-but-set-variable] 514 | double x, y, time; | ^~~~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c app.cpp -o app.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c baseline.cpp -o baseline.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bucket.cpp -o bucket.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c init_visual.cpp -o init_visual.o g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o Rlibkdv.so EDWIN_multiple.o EDWIN_otf.o RcppExports.o SLAM.o SWS.o alg_visual.o app.o baseline.o bucket.o init_visual.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/Rlibkdv/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/Rlibkdv/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/Rlibkdv/src' installing to /data/gannet/ripley/R/packages/tests-devel/Rlibkdv.Rcheck/00LOCK-Rlibkdv/00new/Rlibkdv/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rlibkdv)