• using R Under development (unstable) (2018-06-11 r74889)
• using platform: x86_64-pc-linux-gnu (64-bit)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘RPostgreSQL/DESCRIPTION’ ... OK
• this is package ‘RPostgreSQL’ version ‘0.6-2’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘RPostgreSQL’ can be installed ... [8s/15s] OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in shell scripts ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking include directives in Makefiles ... NOTE
  Found the following Makefile(s) with an include directive with a pathname using R_HOME:
    src/libpq/Makefile.win
  Even though not recommended, variable R_HOME may contain spaces.
  Makefile directives use space as a separator and there is no portable
  way to quote/escape the space in Make rules and directives. However,
  one can and should quote pathnames when passed from Makefile to the
  shell, and this can be done specifically when invoking Make recursively.
  It is therefore recommended to use the Make '-f' option to include files
  in directories specified using R_HOME. This option can be specified
  multiple times to include multiple Makefiles. Note that 'Makeconf' is
  included automatically into top-level makefile of a package.
  More information can be found in 'Writing R Extensions'.
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking examples ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [9s/13s] OK
    Running ‘connectWithNull.R’
    Comparing ‘connectWithNull.Rout’ to ‘connectWithNull.Rout.save’ ...40a41,42
  > <PostgreSQLConnection>
  > [1] TRUE
    Running ‘createTableMixedCaseTest.R’
    Comparing ‘createTableMixedCaseTest.Rout’ to ‘createTableMixedCaseTest.Rout.save’ ...86a87,94
  > Test should create foo1 and Foo2 tables
  > Pass - Foo1 Table does not exist.
  > Pass - foo1 Table exists.
  > Pass - Foo2 Table exists.
  > Pass - foo2 Table does not exist.
  > Pass - "Foo2" Table does not exist.
  > Pass - "foo2" Table does not exist.
  > [1] TRUE
    Running ‘dataTypeTests.R’
    Comparing ‘dataTypeTests.Rout’ to ‘dataTypeTests.Rout.save’ ...115a116,125
  > Read Numeric values
  > GOOD -- all numeric types are as expected
  > GOOD -- all numeric values are as expected
  > Read Logical values
  > GOOD -- all logical types are as expected
  > GOOD -- all logical values are as expected
  > Read Character values
  > GOOD -- all character types are as expected
  > GOOD -- all character values are as expected
  > DONE
    Running ‘dateTZ.R’
    Comparing ‘dateTZ.Rout’ to ‘dateTZ.Rout.save’ ...89a90,163
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > testing UTC
  >
  > **** Trying with timestamp
  > inserted string 1: 2008-07-01 14:15:16.123+00
  > inserted string 2: 2000-01-02 03:04:05.678+00
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > PASS
  > PASS
  >
  >
  > **** Trying with timestamp with time zone
  > inserted string 1: 2008-07-01 14:15:16.123+00
  > inserted string 2: 2000-01-02 03:04:05.678+00
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > PASS
  > PASS
  > testing Asia/Tokyo
  >
  > **** Trying with timestamp
  > inserted string 1: 2008-07-01 14:15:16.123+00
  > inserted string 2: 2000-01-02 03:04:05.678+00
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > PASS
  > PASS
  >
  >
  > **** Trying with timestamp with time zone
  > inserted string 1: 2008-07-01 14:15:16.123+00
  > inserted string 2: 2000-01-02 03:04:05.678+00
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > PASS
  > PASS
  > testing Australlia/South
  >
  > **** Trying with timestamp
  > inserted string 1: 2008-07-01 14:15:16.123+00
  > inserted string 2: 2000-01-02 03:04:05.678+00
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > PASS
  > PASS
  >
  >
  > **** Trying with timestamp with time zone
  > inserted string 1: 2008-07-01 14:15:16.123+00
  > inserted string 2: 2000-01-02 03:04:05.678+00
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > PASS
  > PASS
  > testing America/New_York
  >
  > **** Trying with timestamp
  > inserted string 1: 2008-07-01 14:15:16.123+00
  > inserted string 2: 2000-01-02 03:04:05.678+00
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > PASS
  > PASS
  >
  >
  > **** Trying with timestamp with time zone
  > inserted string 1: 2008-07-01 14:15:16.123+00
  > inserted string 2: 2000-01-02 03:04:05.678+00
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > PASS
  > PASS
  > [1] TRUE
    Running ‘datetimeTests.R’
    Comparing ‘datetimeTests.Rout’ to ‘datetimeTests.Rout.save’ ...67a68,88
  >
  >
  > **** Trying with timestamp
  > tt zz
  > 1 2008-07-01 14:15:16 1
  > 2 2000-01-02 03:04:05 2
  > name Sclass type len precision scale nullOK
  > 1 tt POSIXct TIMESTAMP 8 -1 -1 TRUE
  > [1] "2008-07-01 14:15:16 UTC" "2000-01-02 03:04:05 UTC"
  > [1] "POSIXct" "POSIXt"
  >
  >
  > **** Trying with date
  > tt zz
  > 1 2008-07-01 1
  > 2 2000-01-02 2
  > name Sclass type len precision scale nullOK
  > 1 tt Date DATE 4 -1 -1 TRUE
  > [1] "2008-07-01" "2000-01-02"
  > [1] "Date"
  > [1] TRUE
    Running ‘datetimestampwrite.R’
    Comparing ‘datetimestampwrite.Rout’ to ‘datetimestampwrite.Rout.save’ ...82a83,89
  > Read Date and TIMESTAMP values
  > PASS -- Date type is as expected
  > PASS -- TIMESTAMP is received as POSIXct
  > Check that read after write gets the same data types
  > PASS -- Date type is as expected
  > PASS -- TIMESTAMP is received as POSIXct
  > DONE
    Running ‘dbColumnInfo.R’
    Comparing ‘dbColumnInfo.Rout’ to ‘dbColumnInfo.Rout.save’ ...49a50,66
  > NOTICE: CREATE TABLE / PRIMARY KEY will create implicit index "aa_pkey" for table "aa"
  > dbColumnInfo
  > name Sclass type len precision scale nullOK
  > 1 pk integer INTEGER 4 -1 -1 FALSE
  > 2 v1 double FLOAT8 8 -1 -1 FALSE
  > 3 v2 double FLOAT8 8 -1 -1 TRUE
  > 4 ?column? double FLOAT8 8 -1 -1 NA
  > name Sclass type len precision scale nullOK
  > 1 pk integer INTEGER 4 -1 -1 FALSE
  > 2 v1 double FLOAT8 8 -1 -1 FALSE
  > 3 v2 double FLOAT8 8 -1 -1 TRUE
  > 4 ?column? double FLOAT8 8 -1 -1 NA
  > SELECT result
  > pk v1 v2 ?column?
  > 1 3 2 NA NA
  > Removing "AA"
  > [1] TRUE
    Running ‘dbExistsIssue.R’
    Comparing ‘dbExistsIssue.Rout’ to ‘dbExistsIssue.Rout.save’ ...56a57,60
  > Does rockdata exist? [1] TRUE
  > Does public.rockdata exist? [1] FALSE
  > [1] "Removing rockdata\n"
  > [1] TRUE
    Running ‘dbExistsq.R’
    Comparing ‘dbExistsq.Rout’ to ‘dbExistsq.Rout.save’ ...57a58,62
  > Write rock'data
  > Does rock'data exist? [1] TRUE
  > Does "public.rock'data" exist? [1] FALSE
  > Removing rock'data
  > [1] TRUE
    Running ‘dbExistsqc.R’
    Comparing ‘dbExistsqc.Rout’ to ‘dbExistsqc.Rout.save’ ...95a96,108
  > Does rock.data exist?
  > PASS: true
  > create schema testschema and change the search_path
  > Does rock.data exist?
  > PASS: false as the search_path changed
  > Does testschema."rock.data" exist?
  > PASS: false as the testschema specified
  > Does public."rock.data" exist?
  > PASS: true despite search_path change
  > write in current schema
  > Does rock.data exist?
  > PASS: true
  > [1] TRUE
    Running ‘dbGetQueryParams.R’
    Comparing ‘dbGetQueryParams.Rout’ to ‘dbGetQueryParams.Rout.save’ ...51a52,70
  > row.names area peri shape perm
  > 1 6 7979 4010.15 0.167045 17.1
  > 2 7 9333 4345.75 0.189651 17.1
  > 3 8 8209 4344.75 0.164127 17.1
  > 4 11 9364 4480.05 0.150944 119.0
  > 5 13 10651 4036.54 0.228595 82.4
  > 6 17 10962 4608.66 0.204314 58.6
  > 7 18 10743 4787.62 0.262727 58.6
  > 8 19 11878 4864.22 0.200071 58.6
  > 9 20 9867 4479.41 0.144810 58.6
  > 10 22 11876 4353.14 0.291029 142.0
  > row.names area peri shape perm
  > 1 6 7979 4010.15 0.167045 17.1
  > 2 7 9333 4345.75 0.189651 17.1
  > 3 8 8209 4344.75 0.164127 17.1
  > 4 11 9364 4480.05 0.150944 119.0
  > 5 20 9867 4479.41 0.144810 58.6
  > [1] "Removing rockdata\n"
  > [1] TRUE
    Running ‘dbListFields.R’
    Comparing ‘dbListFields.Rout’ to ‘dbListFields.Rout.save’ ...59a60,65
  > [1] "pk" "v1" "v2"
  > PASS: 3 fields returned
  > [1] "pid" "name"
  > PASS: 2 fields returned
  > Removing "AA"
  > [1] TRUE
    Running ‘dbTransactionTests.R’
    Comparing ‘dbTransactionTests.Rout’ to ‘dbTransactionTests.Rout.save’ ...95a96,109
  > begin transaction in con1
  > create table rockdata in con1
  > PASS rockdata is visible through con1
  > PASS rockdata is invisible through con2
  > commit in con1
  > PASS rockdata is visible through con2
  > remove the table from con1
  > PASS rockdata is invisible through con2
  > begin transaction in con1
  > create table rockdata in con1
  > PASS rockdata is visible through con1
  > RollBack con1
  > PASS rockdata is invisible through con1
  > [1] TRUE
    Running ‘dbWriteTableFailTest.R’
    Comparing ‘dbWriteTableFailTest.Rout’ to ‘dbWriteTableFailTest.Rout.save’ ...72a73,86
  > create incompatible table rockdata
  > write table to rockdata with append=TRUE
  > Error in postgresqlpqExec(new.con, sql4) :
  > RS-DBI driver: (could not Retrieve the result : ERROR: column "row.names" of relation "rockdata" does not exist
  > )
  > write table to rockdata
  > [1] FALSE
  > PASS as the return value is false
  > data frame with 0 columns and 0 rows
  > [1] "Removing rockdata\n"
  > [1] TRUE
  > Warning message:
  > In postgresqlWriteTable(conn, name, value, ...) :
  > table rockdata exists in database: aborting assignTable
    Running ‘dbWriteTableSchema.R’
    Comparing ‘dbWriteTableSchema.Rout’ to ‘dbWriteTableSchema.Rout.save’ ...52a53,65
  > row.names area peri shape perm
  > 1 1 4990 2791.90 0.0903296 6.3
  > 2 2 7002 3892.60 0.1486220 6.3
  > 3 3 7558 3930.66 0.1833120 6.3
  > 4 4 7352 3869.32 0.1170630 6.3
  > 5 5 7943 3948.54 0.1224170 17.1
  > 6 6 7979 4010.15 0.1670450 17.1
  > 7 7 9333 4345.75 0.1896510 17.1
  > 8 8 8209 4344.75 0.1641270 17.1
  > 9 9 8393 3682.04 0.2036540 119.0
  > 10 10 6425 3098.65 0.1623940 119.0
  > [1] "Removing rockdata\n"
  > [1] TRUE
    Running ‘dbWriteTableTest.R’
    Comparing ‘dbWriteTableTest.Rout’ to ‘dbWriteTableTest.Rout.save’ ...52a53,65
  > row.names area peri shape perm
  > 1 1 4990 2791.90 0.0903296 6.3
  > 2 2 7002 3892.60 0.1486220 6.3
  > 3 3 7558 3930.66 0.1833120 6.3
  > 4 4 7352 3869.32 0.1170630 6.3
  > 5 5 7943 3948.54 0.1224170 17.1
  > 6 6 7979 4010.15 0.1670450 17.1
  > 7 7 9333 4345.75 0.1896510 17.1
  > 8 8 8209 4344.75 0.1641270 17.1
  > 9 9 8393 3682.04 0.2036540 119.0
  > 10 10 6425 3098.65 0.1623940 119.0
  > [1] "Removing rockdata\n"
  > [1] TRUE
    Running ‘dbWriteTabletypes.R’
    Comparing ‘dbWriteTabletypes.Rout’ to ‘dbWriteTabletypes.Rout.save’ ...234a235,264
  > row.names strings
  > 1 1 normal
  > 2 2 t\tab
  > 3 3 v\vertical tab
  > 4 4 n\newline
  > 5 5 r carriage \retern
  > 6 6 back \\ slash
  > 7 7 f\form feed
  > [1] "Removing rockdata\n"
  > 1 normal
  > 2 müß
  > [1] "Removing rockdata\n"
  > PASS: could write small umlaut u and ligature sz
  > 1 normal
  > 2 kanji漢字
  > [1] "Removing rockdata\n"
  > PASS: could write kanji
  > Read Numeric values
  > PASS -- all integer is as expected
  > PASS integer value is preservedGOOD -- all numeric values are as expected
  > Read Logical values
  > GOOD -- all logical types are as expected
  > GOOD -- all logical values are as expected
  > Read Character values
  > GOOD -- all character types are as expected
  > GOOD -- all character values are as expected
  > Check that read after write gets the same data types
  > PASS -- Date type is as expected
  > PASS -- TIMESTAMP is received as POSIXct
  > DONE
    Running ‘dbtemptable.R’
    Comparing ‘dbtemptable.Rout’ to ‘dbtemptable.Rout.save’ ...48a49,51
  > name
  > 1 bar
  > PASS -- ended without segmentation fault
    Running ‘escape.R’
    Comparing ‘escape.Rout’ to ‘escape.Rout.save’ ...42a43,45
  > [1] "aaa"
  > [1] "aa''a"
  > [1] TRUE
    Running ‘loadDriverAndConnect.R’
    Comparing ‘loadDriverAndConnect.Rout’ to ‘loadDriverAndConnect.Rout.save’ ...39a40,43
  > datname encoding datallowconn
  > 1 template0 6 FALSE
  > 2 template1 6 TRUE
  > [1] TRUE
    Running ‘openSendQuery.R’
    Comparing ‘openSendQuery.Rout’ to ‘openSendQuery.Rout.save’ ...68a69,74
  > create temp table tmptest with dbGetQuery
  > data frame with 0 columns and 0 rows
  > create temp table tmptest with dbSendQuery
  > data frame with 0 columns and 0 rows
  > PASS tmptest disappeared after disconnection
  > [1] TRUE
    Running ‘selectWhereZero.R’
    Comparing ‘selectWhereZero.Rout’ to ‘selectWhereZero.Rout.save’ ...55a56,67
  > Error in postgresqlExecStatement(conn, statement, ...) :
  > RS-DBI driver: (could not Retrieve the result : ERROR: operator does not exist: text = integer
  > LINE 1: select * from tmpirisdata where "Species"=0
  > ^
  > HINT: No operator matches the given name and argument type(s). You might need to add explicit type casts.
  > )
  > NULL
  > [1] "Removing tmpirisdata\n"
  > PASS: reached to the end of the test code without segmentation fault
  > Warning message:
  > In postgresqlQuickSQL(conn, statement, ...) :
  > Could not create execute: select * from tmpirisdata where "Species"=0
    Running ‘selectWithAlias.R’
    Comparing ‘selectWithAlias.Rout’ to ‘selectWithAlias.Rout.save’ ...53a54,66
  > ar pe sh pr
  > 1 4990 2791.90 0.0903296 6.3
  > 2 7002 3892.60 0.1486220 6.3
  > 3 7558 3930.66 0.1833120 6.3
  > 4 7352 3869.32 0.1170630 6.3
  > 5 7943 3948.54 0.1224170 17.1
  > 6 7979 4010.15 0.1670450 17.1
  > 7 9333 4345.75 0.1896510 17.1
  > 8 8209 4344.75 0.1641270 17.1
  > 9 8393 3682.04 0.2036540 119.0
  > 10 6425 3098.65 0.1623940 119.0
  > [1] "Removing rockdata\n"
  > [1] TRUE
    Running ‘unknowntype.R’
    Comparing ‘unknowntype.Rout’ to ‘unknowntype.Rout.save’ ...58a59,67
  > <PostgreSQLResult>
  > name Sclass type len precision scale nullOK
  > 1 ra character UNKNOWN -1 -1 -1 TRUE
  > data frame with 0 columns and 0 rows
  > [1] "Removing tmpirisdata\n"
  > PASS: reached to the end of the test code without segmentation fault
  > Warning message:
  > In postgresqlDescribeFields(res, ...) :
  > RS-DBI driver warning: (unknown (1021))
• checking PDF version of manual ... OK
• DONE

Status: 1 NOTE