* installing *source* package ‘PRTree’ ...
** package ‘PRTree’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using Fortran compiler: ‘GNU Fortran (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/PRTree/src'
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c PRTree_init.c -o PRTree_init.o
gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c base.f90 -o base.o
base.f90:60:11:
60 | return
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:69:11:
69 | return
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:78:11:
78 | return
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:87:11:
87 | return
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:96:11:
96 | return
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:105:11:
105 | return
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:114:11:
114 | return
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:230:52:
230 | type(nm) :: new_nodes(ncol*2), nodes_at(ncol*2)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:450:57:
450 | if(1 - MSE_list(2)/MSE_list(1) < cp) goto 999
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:473:55:
473 | nodes_info(n_nodes+1:n_nodes+2) = nodes_info_at
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:490:51:
490 | terminal_nodes = pack(nodes_info%node, ind)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:508:37:
508 | type(tr), intent(inout) :: tree
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:516:55:
516 | real(dp), intent(in) :: sigma(dim_s(1), dim_s(2))
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:545:23:
545 | tree%gamma = gamma
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:558:38:
558 | tree%nodes_matrix = nodes_matrix
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:695:26:
695 | if(Iindep == 0) goto 10
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:699:25:
699 | do i = 1, dim_sigma(1)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:718:12:
718 | 10 continue
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
base.f90:237:43:
237 | integer :: n_terminal_nodes, n_nodes, i, j, k , n_split, node, node_split
| 1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
base.f90:238:22:
238 | integer :: node_rm, father, var, var_at, ind_Z(1)
| 1
Warning: Unused variable 'node_rm' declared at (1) [-Wunused-variable]
base.f90:236:26:
236 | real(dp) :: yhat(nrow), MSE, val_at
| 1
Warning: Unused variable 'yhat' declared at (1) [-Wunused-variable]
base.f90:681:38:
681 | real(dp) :: val_at, MSE_temp, gen_dp
| 1
Warning: Unused variable 'gen_dp' declared at (1) [-Wunused-variable]
base.f90:683:23:
683 | integer :: i, gen_int
| 1
Warning: Unused variable 'gen_int' declared at (1) [-Wunused-variable]
base.f90:681:20:
681 | real(dp) :: val_at, MSE_temp, gen_dp
| 1
Warning: Unused variable 'val_at' declared at (1) [-Wunused-variable]
base.f90:474:40:
474 | nodes_info(father)%isTerminal = 0
| ^
Warning: 'father' may be used uninitialized [-Wmaybe-uninitialized]
base.f90:238:30:
238 | integer :: node_rm, father, var, var_at, ind_Z(1)
| ^
note: 'father' was declared here
base.f90:476:43:
476 | nodes_info(father)%cutpoint = val_at
| ^
Warning: 'val_at' may be used uninitialized [-Wmaybe-uninitialized]
base.f90:236:39:
236 | real(dp) :: yhat(nrow), MSE, val_at
| ^
note: 'val_at' was declared here
base.f90:475:41:
475 | nodes_info(father)%varCut = var_at
| ^
Warning: 'var_at' may be used uninitialized [-Wmaybe-uninitialized]
base.f90:238:43:
238 | integer :: node_rm, father, var, var_at, ind_Z(1)
| ^
note: 'var_at' was declared here
gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o PRTree.so PRTree_init.o base.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/PRTree/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/PRTree/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/PRTree/src'
installing to /data/gannet/ripley/R/packages/tests-devel/PRTree.Rcheck/00LOCK-PRTree/00new/PRTree/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (PRTree)