* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/MGLM.Rcheck’
* using R Under development (unstable) (2024-04-05 r86344)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc-13 (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘MGLM/DESCRIPTION’ ... OK
* this is package ‘MGLM’ version ‘0.2.1’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MGLM’ can be installed ... [13s/17s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/MGLM-00install.html' for details.
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [24s/28s] OK
* checking Rd files ... NOTE
checkRd: (-1) MGLMfit.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMfit.Rd:69: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMfit.Rd:70: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMfit.Rd:71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMfit.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMfit.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMfit.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMfit.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMfit.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMfit.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMfit.Rd:78: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMfit.Rd:79: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:78: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:79: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:80: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:81: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:82: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:83: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:84: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:85: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:86: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:87: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:88: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:89: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMreg.Rd:90: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMsparsereg.Rd:96: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMsparsereg.Rd:97: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMsparsereg.Rd:98: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMsparsereg.Rd:99: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMsparsereg.Rd:100: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMsparsereg.Rd:101: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMsparsereg.Rd:102-106: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMsparsereg.Rd:107: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMsparsereg.Rd:108-109: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMsparsereg.Rd:110: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMtune.Rd:64: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) MGLMtune.Rd:65: Lost braces in \itemize; \value handles \item{}{} directly
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [16s/19s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [100s/112s] OK
* checking PDF version of manual ... [9s/14s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE