* installing *source* package ‘KERE’ ... ** package ‘KERE’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using Fortran compiler: ‘GNU Fortran (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/KERE/src' gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c expkern_fast.f90 -o expkern_fast.o expkern_fast.f90:29:2: 29 | DOUBLE PRECISION :: mbd | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:30:2: 30 | DOUBLE PRECISION :: Ginv | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:31:2: 31 | DOUBLE PRECISION :: r (nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:32:2: 32 | DOUBLE PRECISION :: phi (nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:33:2: 33 | DOUBLE PRECISION :: alpvec (nobs+1) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:34:2: 34 | DOUBLE PRECISION :: oalpvec (nobs+1) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:35:2: 35 | DOUBLE PRECISION :: dif (nobs+1) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:36:2: 36 | DOUBLE PRECISION :: Ddiag (nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:37:2: 37 | DOUBLE PRECISION :: Ainv (nobs, nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:38:2: 38 | DOUBLE PRECISION :: BAmat (nobs, nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:39:2: 39 | DOUBLE PRECISION :: Qinv (nobs, nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:40:2: 40 | DOUBLE PRECISION :: QKsum (nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:41:2: 41 | DOUBLE PRECISION :: KUinv (nobs+1, nobs+1) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:42:2: 42 | DOUBLE PRECISION :: Ktemp (nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:48:2: 48 | mbd = 2.0D0 * MAX(1.0D0-omega, omega) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:49:2: 49 | npass = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:50:2: 50 | r = y | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:51:2: 51 | alpmat = 0.0D0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:52:2: 52 | alpvec = 0.0D0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:53:2: 53 | lambda_loop: DO l = 1,nlam | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:54:2: 54 | dif = 0.0D0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:56:2: 56 | Ddiag = 1.0D0/(Dvec*Dvec + 2.0D0*ulam(l)*Dvec/mbd) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:57:2: 57 | Ainv = Umat * SPREAD(Ddiag, DIM=1, NCOPIES = nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:58:2: 58 | Ainv = MATMUL(Ainv, TRANSPOSE(Umat)) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:59:2: 59 | Ktemp = MATMUL(Ksum, Ainv) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:60:2: 60 | FORALL (i=1:nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:61:2: 61 | FORALL(j=1:nobs) BAmat(i,j) = - Ksum(i) * Ktemp(j) / REAL(nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:62:2: 62 | END FORALL | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:63:2: 63 | Ginv = 1.0D0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:64:2: 64 | DO j = 1, nobs | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:65:2: 65 | Ginv = Ginv + BAmat(j, j) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:66:2: 66 | ENDDO | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:67:2: 67 | Ginv = 1.0D0 / Ginv | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:68:2: 68 | Qinv = Ainv - Ginv * MATMUL(Ainv, BAmat) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:69:2: 69 | QKsum = MATMUL(Qinv, Ksum) / REAL(nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:70:2: 70 | KUinv = 0.0D0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:71:2: 71 | KUinv(1, 1) = (1.0D0 + DOT_PRODUCT(QKsum, Ksum)) / REAL(nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:72:2: 72 | KUinv(1, 2:(nobs+1)) = -QKsum | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:73:2: 73 | KUinv(2:(nobs+1), 1) = -QKsum | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:74:2: 74 | KUinv(2:(nobs+1), 2:(nobs+1)) = Qinv | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:76:2: 76 | alpha_loop: DO | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:77:2: 77 | DO j = 1, nobs | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:84:2: 84 | oalpvec = alpvec | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:85:2: 85 | alpvec = oalpvec + (2.0D0/mbd) * MATMUL(KUinv, & | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:87:2: 87 | dif = alpvec - oalpvec | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:88:2: 88 | r = r - MATMUL(dif, Ki) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:89:2: 89 | IF (DOT_PRODUCT(dif,dif)/DOT_PRODUCT(oalpvec,oalpvec) < eps) EXIT | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:90:2: 90 | npass(l) = npass(l) + 1 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:91:2: 91 | IF (SUM(npass) > maxit) EXIT | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:92:2: 92 | ENDDO alpha_loop | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:93:2: 93 | alpmat(:, l) = alpvec | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:94:2: 94 | IF (SUM(npass) > maxit) THEN | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:95:2: 95 | jerr = -l | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:96:2: 96 | EXIT | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:97:2: 97 | ENDIF | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:98:2: 98 | anlam = l | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_fast.f90:99:2: 99 | ENDDO lambda_loop | 1 Warning: Nonconforming tab character at (1) [-Wtabs] gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c expkern_precision.f90 -o expkern_precision.o expkern_precision.f90:29:2: 29 | DOUBLE PRECISION :: mbd | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:30:2: 30 | DOUBLE PRECISION :: Ginv | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:31:2: 31 | DOUBLE PRECISION :: r (nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:32:2: 32 | DOUBLE PRECISION :: phi (nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:33:2: 33 | DOUBLE PRECISION :: alpvec (nobs+1) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:34:2: 34 | DOUBLE PRECISION :: oalpvec (nobs+1) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:35:2: 35 | DOUBLE PRECISION :: dif (nobs+1) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:36:2: 36 | DOUBLE PRECISION :: Ddiag (nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:37:2: 37 | DOUBLE PRECISION :: Ainv (nobs, nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:38:2: 38 | DOUBLE PRECISION :: BAmat (nobs, nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:39:2: 39 | DOUBLE PRECISION :: Bmat (nobs, nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:40:2: 40 | DOUBLE PRECISION :: Qinv (nobs, nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:41:2: 41 | DOUBLE PRECISION :: QKsum (nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:42:2: 42 | DOUBLE PRECISION :: KUinv (nobs+1, nobs+1) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:48:2: 48 | mbd = 2.0D0 * MAX(1.0D0-omega, omega) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:49:2: 49 | npass = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:50:2: 50 | r = y | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:51:2: 51 | alpmat = 0.0D0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:52:2: 52 | alpvec = 0.0D0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:53:2: 53 | Bmat = - spread(Ksum,dim=2,ncopies=nobs) & | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:55:2: 55 | lambda_loop: DO l = 1,nlam | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:56:2: 56 | dif = 0.0D0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:58:2: 58 | Ddiag = 1.0D0/(Dvec*Dvec + 2.0D0*ulam(l)*Dvec/mbd) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:59:2: 59 | Ainv = Umat * SPREAD(Ddiag, DIM=1, NCOPIES = nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:60:2: 60 | Ainv = MATMUL(Ainv, TRANSPOSE(Umat)) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:61:2: 61 | BAmat = MATMUL(Bmat, Ainv) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:62:2: 62 | Ginv = 1.0D0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:63:2: 63 | DO j = 1, nobs | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:64:2: 64 | Ginv = Ginv + BAmat(j, j) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:65:2: 65 | ENDDO | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:66:2: 66 | Ginv = 1.0D0 / Ginv | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:67:2: 67 | Qinv = Ainv - Ginv * MATMUL(Ainv, BAmat) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:68:2: 68 | QKsum = MATMUL(Qinv, Ksum) / REAL(nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:69:2: 69 | KUinv = 0.0D0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:70:2: 70 | KUinv(1, 1) = (1.0D0 + DOT_PRODUCT(QKsum, Ksum)) / REAL(nobs) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:71:2: 71 | KUinv(1, 2:(nobs+1)) = -QKsum | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:72:2: 72 | KUinv(2:(nobs+1), 1) = -QKsum | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:73:2: 73 | KUinv(2:(nobs+1), 2:(nobs+1)) = Qinv | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:75:2: 75 | alpha_loop: DO | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:76:2: 76 | DO j = 1, nobs | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:83:2: 83 | oalpvec = alpvec | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:84:2: 84 | alpvec = oalpvec + (2.0D0/mbd) * MATMUL(KUinv, & | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:86:2: 86 | dif = alpvec - oalpvec | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:87:2: 87 | r = r - MATMUL(dif, Ki) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:88:2: 88 | IF (DOT_PRODUCT(dif,dif)/DOT_PRODUCT(oalpvec,oalpvec) < eps) EXIT | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:89:2: 89 | npass(l) = npass(l) + 1 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:90:2: 90 | IF (SUM(npass) > maxit) EXIT | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:91:2: 91 | ENDDO alpha_loop | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:92:2: 92 | alpmat(:, l) = alpvec | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:93:2: 93 | IF (SUM(npass) > maxit) THEN | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:94:2: 94 | jerr = -l | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:95:2: 95 | EXIT | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:96:2: 96 | ENDIF | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:97:2: 97 | anlam = l | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:98:2: 98 | ENDDO lambda_loop | 1 Warning: Nonconforming tab character at (1) [-Wtabs] expkern_precision.f90:25:18: 25 | INTEGER :: i | 1 Warning: Unused variable 'i' declared at (1) [-Wunused-variable] gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o KERE.so expkern_fast.o expkern_precision.o -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/KERE/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/KERE/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/KERE/src' installing to /data/gannet/ripley/R/packages/tests-devel/KERE.Rcheck/00LOCK-KERE/00new/KERE/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (KERE)