* installing *source* package ‘GEEaSPU’ ...
** package ‘GEEaSPU’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/GEEaSPU/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c GEEaSPU.cpp -o GEEaSPU.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
GEEaSPU.cpp: In function 'double count_if(arma::uvec)':
GEEaSPU.cpp:24:22: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'unsigned int'} [-Wsign-compare]
   24 |     for(int i = 0; i < x.size(); i++) {
      |                    ~~^~~~~~~~~~
GEEaSPU.cpp: In function 'Rcpp::List perm(arma::mat, arma::mat, arma::mat, int, int, int, arma::mat, arma::mat, int)':
GEEaSPU.cpp:329:23: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
  329 |     for (int j = 0; j < T0s.n_cols; j++) {
      |                     ~~^~~~~~~~~~~~
GEEaSPU.cpp: In function 'Rcpp::List sim(int, arma::vec, arma::mat, arma::mat, arma::mat, arma::mat, arma::mat, int, int, int, int, arma::mat, arma::mat, int)':
GEEaSPU.cpp:561:23: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
  561 |     for (int j = 0; j < T0s.n_cols; j++) {
      |                     ~~^~~~~~~~~~~~
GEEaSPU.cpp: In function 'Rcpp::List permpath(arma::mat, arma::mat, arma::mat, arma::vec, int, int, int, int, arma::mat, arma::mat, arma::mat, int)':
GEEaSPU.cpp:882:23: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
  882 |     for (int j = 0; j < T0s.n_cols; j++) {
      |                     ~~^~~~~~~~~~~~
g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o GEEaSPU.so GEEaSPU.o RcppExports.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/GEEaSPU/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/GEEaSPU/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/GEEaSPU/src'
installing to /data/gannet/ripley/R/packages/tests-devel/GEEaSPU.Rcheck/00LOCK-GEEaSPU/00new/GEEaSPU/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GEEaSPU)