- using R Under development (unstable) (2018-04-14 r74601)
- using platform: x86_64-pc-linux-gnu (64-bit)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘CombMSC/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘CombMSC’ version ‘1.4.2’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘CombMSC’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘lattice’ ‘rgl’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
- checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
AIC.fmo Adj.Rsq.fmo Adj.Rsq.lm BIC.fmo Cp.fmo Cp.lm PRESS.fmo
PRESS.lm fit.Models.glmFormula fit.Models.lmFormula fit.Models.tsm
gen.Data.glmFormula gen.Data.lmFormula gen.Data.tsm
gen.Params.lmFormula gen.Params.tsm holdout.Mean.Arima
holdout.Mean.default holdout.Mean.fmo holdout.Mean.lm
holdout.Med.Arima holdout.Med.default holdout.Med.fmo holdout.Med.lm
holdout.SS.Arima holdout.SS.default holdout.SS.fmo holdout.SS.lm
num.Terms.formula num.Terms.tsm plot.msc print.msc print.summary.msc
print.tsm summary.msc
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
Found an obsolete/platform-specific call in the following function:
‘plot.msc’
Found the platform-specific device:
‘win.graph’
dev.new() is the preferred way to open a new device, in the unlikely
event one is needed.
AIC.fmo: no visible global function definition for ‘AIC’
BIC.fmo: no visible global function definition for ‘AIC’
PRESS.lm: no visible global function definition for ‘hatvalues’
TMC: no visible binding for global variable ‘median’
TMC: no visible global function definition for ‘runif’
TMC: no visible global function definition for ‘lm’
compare: no visible global function definition for ‘plot’
fit.Models.glmFormula: no visible binding for global variable
‘binomial’
fit.Models.glmFormula: no visible global function definition for ‘glm’
fit.Models.lmFormula: no visible global function definition for ‘lm’
fit.Models.tsm: no visible global function definition for ‘arima’
gen.Data.glmFormula: no visible global function definition for
‘delete.response’
gen.Data.glmFormula: no visible global function definition for ‘terms’
gen.Data.glmFormula: no visible global function definition for
‘model.frame’
gen.Data.glmFormula: no visible global function definition for
‘model.matrix’
gen.Data.glmFormula: no visible global function definition for ‘rbinom’
gen.Data.lmFormula: no visible global function definition for
‘delete.response’
gen.Data.lmFormula: no visible global function definition for ‘terms’
gen.Data.lmFormula: no visible global function definition for
‘model.frame’
gen.Data.lmFormula: no visible global function definition for
‘model.matrix’
gen.Data.lmFormula: no visible global function definition for ‘rnorm’
gen.Params.lmFormula: no visible global function definition for ‘rnorm’
gen.Params.tsm : make.Ind.Par: no visible global function definition
for ‘runif’
holdout.Mean.Arima: no visible global function definition for ‘predict’
holdout.Mean.default: no visible global function definition for
‘predict’
holdout.Mean.lm: no visible global function definition for ‘predict’
holdout.Med.Arima: no visible global function definition for ‘predict’
holdout.Med.Arima: no visible global function definition for ‘median’
holdout.Med.default: no visible global function definition for
‘predict’
holdout.Med.default: no visible global function definition for ‘median’
holdout.Med.lm: no visible global function definition for ‘predict’
holdout.Med.lm: no visible global function definition for ‘median’
holdout.SS.Arima: no visible global function definition for ‘predict’
holdout.SS.default: no visible global function definition for ‘predict’
holdout.SS.lm: no visible global function definition for ‘predict’
make.Model.List.Reg : <anonymous>: no visible global function
definition for ‘as.formula’
num.Terms.formula: no visible global function definition for ‘terms’
plot.msc : showResults: no visible global function definition for
‘rgl.open’
plot.msc : showResults: no visible global function definition for
‘rgl.clear’
plot.msc : showResults: no visible global function definition for
‘rgl.bg’
plot.msc : showResults: no visible binding for global variable ‘lines’
plot.msc : showResults: no visible global function definition for
‘rgl.light’
plot.msc : showResults: no visible global function definition for
‘rgl.bbox’
plot.msc : showResults: no visible global function definition for
‘rgl.surface’
plot.msc : showResults: no visible global function definition for
‘rgl.spheres’
plot.msc : showResults: no visible global function definition for
‘axes3d’
plot.msc : showResults: no visible global function definition for
‘title3d’
plot.msc : showResults: no visible global function definition for
‘rgl.viewpoint’
plot.msc: no visible global function definition for ‘plot’
plot.msc: no visible global function definition for ‘xyplot’
plot.msc : mypanel: no visible global function definition for
‘panel.fill’
plot.msc : mypanel: no visible global function definition for
‘panel.grid’
plot.msc : mypanel: no visible global function definition for
‘panel.levelplot’
plot.msc: no visible global function definition for ‘levelplot’
plot.msc : <anonymous>: no visible global function definition for
‘axis.default’
plot.msc : <anonymous>: no visible global function definition for
‘panel.text’
plot.msc: no visible global function definition for ‘gray’
plot.msc: no visible global function definition for ‘shingle’
plot.msc: no visible global function definition for ‘strip.custom’
sarima.Sim: no visible binding for global variable ‘rnorm’
sarima.Sim: no visible global function definition for ‘arima.sim’
sarima.Sim: no visible global function definition for ‘ts’
splitTrainTest: no visible global function definition for ‘ts’
Undefined global functions or variables:
AIC arima arima.sim as.formula axes3d axis.default binomial
delete.response glm gray hatvalues levelplot lines lm median
model.frame model.matrix panel.fill panel.grid panel.levelplot
panel.text plot predict rbinom rgl.bbox rgl.bg rgl.clear rgl.light
rgl.open rgl.spheres rgl.surface rgl.viewpoint rnorm runif shingle
strip.custom terms title3d ts xyplot
Consider adding
importFrom("grDevices", "gray")
importFrom("graphics", "lines", "plot")
importFrom("stats", "AIC", "arima", "arima.sim", "as.formula",
"binomial", "delete.response", "glm", "hatvalues", "lm",
"median", "model.frame", "model.matrix", "predict",
"rbinom", "rnorm", "runif", "terms", "ts")
to your NAMESPACE file.
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... NOTE
Rd file 'TMC.Rd':
\usage lines wider than 90 characters:
TMC(num.Iter = 50, data.Size = 100, make.Data = gen.Data, make.Params = gen.Params, model.List, weight.Vector = rep(1, times = length(m ... [TRUNCATED]
\examples lines wider than 100 characters:
result <- TMC(num.Iter = 3, model.List = make.Model.List.Reg(vars), msc.List = list(BIC, AIC, PRESS), var.Frame = vars)
Rd file 'make.Model.List.Reg.Rd':
\usage lines wider than 90 characters:
make.Model.List.Reg(fram, max.Size = min(8, dim(fram)[2]), no.Intercepts = FALSE, GLM = FALSE)
Rd file 'sarima.Sim.Rd':
\usage lines wider than 90 characters:
sarima.Sim(n = 20, period = 12, model, seasonal, rand.Gen.Fun = rnorm, rand.Gen.Seas = rnorm)
These lines will be truncated in the PDF manual.
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... OK
- checking PDF version of manual ... OK
- DONE
Status: 4 NOTEs