* installing *source* package ‘BigQuic’ ... ** package ‘BigQuic’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (GCC) 13.2.0’ using C++ compiler: ‘g++-13 (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/BigQuic/src' gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c BigQuic_init.c -o BigQuic_init.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c balance.c -o balance.o balance.c: In function '__Balance2Way': balance.c:27:17: warning: unused variable 'ed' [-Wunused-variable] 27 | idxtype *id, *ed; | ^~ balance.c:27:12: warning: unused variable 'id' [-Wunused-variable] 27 | idxtype *id, *ed; | ^~ balance.c:26:32: warning: unused variable 'gain' [-Wunused-variable] 26 | int i, j, nvtxs, from, imax, gain, mindiff; | ^~~~ balance.c:26:26: warning: unused variable 'imax' [-Wunused-variable] 26 | int i, j, nvtxs, from, imax, gain, mindiff; | ^~~~ balance.c:26:20: warning: unused variable 'from' [-Wunused-variable] 26 | int i, j, nvtxs, from, imax, gain, mindiff; | ^~~~ balance.c:26:13: warning: unused variable 'nvtxs' [-Wunused-variable] 26 | int i, j, nvtxs, from, imax, gain, mindiff; | ^~~~~ balance.c:26:10: warning: unused variable 'j' [-Wunused-variable] 26 | int i, j, nvtxs, from, imax, gain, mindiff; | ^ balance.c:26:7: warning: unused variable 'i' [-Wunused-variable] 26 | int i, j, nvtxs, from, imax, gain, mindiff; | ^ balance.c: In function '__Bnd2WayBalance': balance.c:53:63: warning: unused variable 'me' [-Wunused-variable] 53 | int i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, pass, me, tmp; | ^~ balance.c:53:57: warning: unused variable 'pass' [-Wunused-variable] 53 | int i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, pass, me, tmp; | ^~~~ balance.c: In function '__General2WayBalance': balance.c:179:63: warning: unused variable 'me' [-Wunused-variable] 179 | int i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, pass, me, tmp; | ^~ balance.c:179:57: warning: unused variable 'pass' [-Wunused-variable] 179 | int i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, pass, me, tmp; | ^~~~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bigquic-run.cpp -o bigquic-run.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bigquic.cpp -o bigquic.o In file included from bigquic-run.cpp:18: bigquic.h: In member function 'void smat_t::ComputeAx_omp(std::vector&, std::vector&, long int)': bigquic.h:216:25: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 216 | for ( long i=0 ; i&, std::vector&, long int)': bigquic.h:216:25: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 216 | for ( long i=0 ; i&)': bigquic.cpp:106:11: warning: unused variable 'timebegin' [-Wunused-variable] 106 | double timebegin; // = omp_get_wtime(); | ^~~~~~~~~ bigquic.cpp: In function 'void QUIC(int, int, double*, double, double, int, int, int, int, smat_t&, std::vector&, std::vector&)': bigquic.cpp:392:17: warning: unused variable 'iserr' [-Wunused-variable] 392 | int iserr = 0; | ^~~~~ bigquic.cpp:677:26: warning: unused variable 'tttbegin' [-Wunused-variable] 677 | double tttbegin; //= omp_get_wtime(); | ^~~~~~~~ bigquic.cpp:339:14: warning: unused variable 'newton_loop_time_begin' [-Wunused-variable] 339 | double newton_loop_time_begin; // = omp_get_wtime(); | ^~~~~~~~~~~~~~~~~~~~~~ bigquic.cpp:881:14: warning: unused variable 'timebegin' [-Wunused-variable] 881 | double timebegin; // = omp_get_wtime(); | ^~~~~~~~~ bigquic.cpp:271:11: warning: variable 'trSX' set but not used [-Wunused-but-set-variable] 271 | double trSX = 0.0; | ^~~~ bigquic.cpp:272:11: warning: variable 'logdetX' set but not used [-Wunused-but-set-variable] 272 | double logdetX = 0.0; | ^~~~~~~ bigquic.cpp:324:11: warning: unused variable 'total_time_cd' [-Wunused-variable] 324 | double total_time_cd = 0; | ^~~~~~~~~~~~~ bigquic.cpp:325:11: warning: unused variable 'total_time_Wcomp' [-Wunused-variable] 325 | double total_time_Wcomp = 0; | ^~~~~~~~~~~~~~~~ bigquic.cpp:326:11: warning: unused variable 'total_time_Ucomp' [-Wunused-variable] 326 | double total_time_Ucomp = 0; | ^~~~~~~~~~~~~~~~ bigquic.cpp:327:11: warning: unused variable 'total_time_FormActive' [-Wunused-variable] 327 | double total_time_FormActive = 0; | ^~~~~~~~~~~~~~~~~~~~~ bigquic.cpp:328:11: warning: unused variable 'total_time_linesearch' [-Wunused-variable] 328 | double total_time_linesearch = 0; | ^~~~~~~~~~~~~~~~~~~~~ bigquic.cpp:329:11: warning: unused variable 'total_time_gradient' [-Wunused-variable] 329 | double total_time_gradient = 0; | ^~~~~~~~~~~~~~~~~~~ bigquic.cpp:330:11: warning: unused variable 'total_scan_freeset' [-Wunused-variable] 330 | double total_scan_freeset = 0; | ^~~~~~~~~~~~~~~~~~ bigquic.cpp:332:18: warning: unused variable 'pathIdx' [-Wunused-variable] 332 | unsigned long pathIdx = 0; | ^~~~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c coarsen.c -o coarsen.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c compress.c -o compress.o compress.c: In function '__PruneGraph': compress.c:167:40: warning: unused variable 'pvwgt' [-Wunused-variable] 167 | idxtype *pxadj, *padjncy, *padjwgt, *pvwgt; | ^~~~~ compress.c:167:30: warning: unused variable 'padjwgt' [-Wunused-variable] 167 | idxtype *pxadj, *padjncy, *padjwgt, *pvwgt; | ^~~~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c debug.c -o debug.o debug.c: In function '__CheckBnd': debug.c:151:45: warning: variable 'bndind' set but not used [-Wunused-but-set-variable] 151 | idxtype *xadj, *adjncy, *where, *bndptr, *bndind; | ^~~~~~ debug.c:151:36: warning: variable 'bndptr' set but not used [-Wunused-but-set-variable] 151 | idxtype *xadj, *adjncy, *where, *bndptr, *bndind; | ^~~~~~ debug.c: In function '__CheckBnd2': debug.c:187:45: warning: variable 'bndind' set but not used [-Wunused-but-set-variable] 187 | idxtype *xadj, *adjncy, *where, *bndptr, *bndind; | ^~~~~~ debug.c:187:36: warning: variable 'bndptr' set but not used [-Wunused-but-set-variable] 187 | idxtype *xadj, *adjncy, *where, *bndptr, *bndind; | ^~~~~~ debug.c: In function '__CheckNodeBnd': debug.c:222:45: warning: variable 'bndind' set but not used [-Wunused-but-set-variable] 222 | idxtype *xadj, *adjncy, *where, *bndptr, *bndind; | ^~~~~~ debug.c:222:36: warning: variable 'bndptr' set but not used [-Wunused-but-set-variable] 222 | idxtype *xadj, *adjncy, *where, *bndptr, *bndind; | ^~~~~~ debug.c:222:19: warning: variable 'adjncy' set but not used [-Wunused-but-set-variable] 222 | idxtype *xadj, *adjncy, *where, *bndptr, *bndind; | ^~~~~~ debug.c:222:12: warning: variable 'xadj' set but not used [-Wunused-but-set-variable] 222 | idxtype *xadj, *adjncy, *where, *bndptr, *bndind; | ^~~~ debug.c:221:10: warning: unused variable 'j' [-Wunused-variable] 221 | int i, j, nvtxs, nbnd; | ^ debug.c: In function '__CheckNodePartitionParams': debug.c:275:28: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 275 | idxtype *xadj, *adjncy, *adjwgt, *vwgt, *where; | ^~~~~~ debug.c:274:16: warning: unused variable 'l' [-Wunused-variable] 274 | int i, j, k, l, nvtxs, me, other; | ^ debug.c:274:13: warning: unused variable 'k' [-Wunused-variable] 274 | int i, j, k, l, nvtxs, me, other; | ^ debug.c: In function '__IsSeparable': debug.c:322:19: warning: variable 'adjncy' set but not used [-Wunused-but-set-variable] 322 | idxtype *xadj, *adjncy, *where; | ^~~~~~ debug.c:321:20: warning: variable 'other' set but not used [-Wunused-but-set-variable] 321 | int i, j, nvtxs, other; | ^~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c estmem.c -o estmem.o estmem.c: In function 'METIS_EstimateMemory': estmem.c:27:13: warning: unused variable 'k' [-Wunused-variable] 27 | int i, j, k, nedges, nlevels; | ^ estmem.c:27:10: warning: unused variable 'j' [-Wunused-variable] 27 | int i, j, k, nedges, nlevels; | ^ estmem.c:27:7: warning: unused variable 'i' [-Wunused-variable] 27 | int i, j, k, nedges, nlevels; | ^ estmem.c: In function '__ComputeCoarseGraphSize': estmem.c:116:30: warning: unused variable 'nedges' [-Wunused-variable] 116 | int i, j, k, istart, iend, nedges, cnedges, v, u; | ^~~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fm.c -o fm.o fm.c: In function '__FM_2WayEdgeRefine': fm.c:26:63: warning: unused variable 'me' [-Wunused-variable] 26 | int i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, pass, me, limit, tmp; | ^~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c fortran.c -o fortran.o fortran.c: In function '__ChangeMesh2FNumbering2': fortran.c:132:10: warning: unused variable 'nedges' [-Wunused-variable] 132 | int i, nedges; | ^~~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c frename.c -o frename.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c graph.c -o graph.o graph.c: In function '__SetUpGraph': graph.c:27:13: warning: unused variable 'k' [-Wunused-variable] 27 | int i, j, k, sum, gsize; | ^ graph.c: In function '__VolSetUpGraph': graph.c:217:13: warning: unused variable 'k' [-Wunused-variable] 217 | int i, j, k, sum, gsize; | ^ graph.c: In function '__IsConnected2': graph.c:498:28: warning: variable 'where' set but not used [-Wunused-but-set-variable] 498 | idxtype *xadj, *adjncy, *where, *touched, *queue; | ^~~~~ graph.c:497:50: warning: unused variable 'wgt' [-Wunused-variable] 497 | int i, j, k, nvtxs, first, last, nleft, ncmps, wgt; | ^~~ graph.c: In function '__FindComponents': graph.c:563:28: warning: variable 'where' set but not used [-Wunused-but-set-variable] 563 | idxtype *xadj, *adjncy, *where, *touched, *queue; | ^~~~~ graph.c:562:50: warning: unused variable 'wgt' [-Wunused-variable] 562 | int i, j, k, nvtxs, first, last, nleft, ncmps, wgt; | ^~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c initpart.c -o initpart.o initpart.c: In function '__GrowBisection': initpart.c:89:30: warning: unused variable 'gain' [-Wunused-variable] 89 | idxtype *queue, *touched, *gain, *bestwhere; | ^~~~ initpart.c:88:35: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 88 | idxtype *xadj, *vwgt, *adjncy, *adjwgt, *where; | ^~~~~~ initpart.c:87:117: warning: unused variable 'pass' [-Wunused-variable] 87 | int i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~~~ initpart.c:87:113: warning: unused variable 'me' [-Wunused-variable] 87 | int i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~ initpart.c:87:105: warning: unused variable 'mincut' [-Wunused-variable] 87 | int i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~~~~~ initpart.c:87:99: warning: unused variable 'icut' [-Wunused-variable] 87 | int i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~~~ initpart.c:87:84: warning: unused variable 'from' [-Wunused-variable] 87 | int i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~~~ initpart.c: In function '__GrowBisectionNode': initpart.c:217:30: warning: unused variable 'gain' [-Wunused-variable] 217 | idxtype *queue, *touched, *gain, *bestwhere; | ^~~~ initpart.c:216:35: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 216 | idxtype *xadj, *vwgt, *adjncy, *adjwgt, *where, *bndind; | ^~~~~~ initpart.c:215:128: warning: unused variable 'pass' [-Wunused-variable] 215 | int i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], tpwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~~~ initpart.c:215:124: warning: unused variable 'me' [-Wunused-variable] 215 | int i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], tpwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~ initpart.c:215:116: warning: unused variable 'mincut' [-Wunused-variable] 215 | int i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], tpwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~~~~~ initpart.c:215:110: warning: unused variable 'icut' [-Wunused-variable] 215 | int i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], tpwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~~~ initpart.c:215:95: warning: unused variable 'from' [-Wunused-variable] 215 | int i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], tpwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~~~ initpart.c: In function '__RandomBisection': initpart.c:352:35: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 352 | idxtype *xadj, *vwgt, *adjncy, *adjwgt, *where; | ^~~~~~ initpart.c:352:26: warning: variable 'adjncy' set but not used [-Wunused-but-set-variable] 352 | idxtype *xadj, *vwgt, *adjncy, *adjwgt, *where; | ^~~~~~ initpart.c:352:12: warning: variable 'xadj' set but not used [-Wunused-but-set-variable] 352 | idxtype *xadj, *vwgt, *adjncy, *adjwgt, *where; | ^~~~ initpart.c:351:94: warning: unused variable 'pass' [-Wunused-variable] 351 | int i, ii, j, k, nvtxs, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~~~ initpart.c:351:90: warning: unused variable 'me' [-Wunused-variable] 351 | int i, ii, j, k, nvtxs, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~ initpart.c:351:82: warning: unused variable 'mincut' [-Wunused-variable] 351 | int i, ii, j, k, nvtxs, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~~~~~ initpart.c:351:76: warning: unused variable 'icut' [-Wunused-variable] 351 | int i, ii, j, k, nvtxs, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~~~ initpart.c:351:61: warning: unused variable 'from' [-Wunused-variable] 351 | int i, ii, j, k, nvtxs, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^~~~ initpart.c:351:17: warning: unused variable 'k' [-Wunused-variable] 351 | int i, ii, j, k, nvtxs, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^ initpart.c:351:14: warning: unused variable 'j' [-Wunused-variable] 351 | int i, ii, j, k, nvtxs, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c kmetis.c -o kmetis.o kmetis.c: In function 'METIS_WPartGraphKway': kmetis.c:50:10: warning: unused variable 'j' [-Wunused-variable] 50 | int i, j; | ^ kmetis.c:50:7: warning: unused variable 'i' [-Wunused-variable] 50 | int i, j; | ^ kmetis.c: In function '__MlevelKWayPartitioning': kmetis.c:98:27: warning: unused variable 'tpwgts2' [-Wunused-variable] 98 | int i, j, nvtxs, tvwgt, tpwgts2[2]; | ^~~~~~~ kmetis.c:98:20: warning: unused variable 'tvwgt' [-Wunused-variable] 98 | int i, j, nvtxs, tvwgt, tpwgts2[2]; | ^~~~~ kmetis.c:98:13: warning: unused variable 'nvtxs' [-Wunused-variable] 98 | int i, j, nvtxs, tvwgt, tpwgts2[2]; | ^~~~~ kmetis.c:98:10: warning: unused variable 'j' [-Wunused-variable] 98 | int i, j, nvtxs, tvwgt, tpwgts2[2]; | ^ kmetis.c:98:7: warning: unused variable 'i' [-Wunused-variable] 98 | int i, j, nvtxs, tvwgt, tpwgts2[2]; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c kvmetis.c -o kvmetis.o kvmetis.c: In function 'METIS_WPartGraphVKway': kvmetis.c:50:10: warning: unused variable 'j' [-Wunused-variable] 50 | int i, j; | ^ kvmetis.c:50:7: warning: unused variable 'i' [-Wunused-variable] 50 | int i, j; | ^ kvmetis.c: In function '__MlevelVolKWayPartitioning': kvmetis.c:100:27: warning: unused variable 'tpwgts2' [-Wunused-variable] 100 | int i, j, nvtxs, tvwgt, tpwgts2[2]; | ^~~~~~~ kvmetis.c:100:20: warning: unused variable 'tvwgt' [-Wunused-variable] 100 | int i, j, nvtxs, tvwgt, tpwgts2[2]; | ^~~~~ kvmetis.c:100:13: warning: unused variable 'nvtxs' [-Wunused-variable] 100 | int i, j, nvtxs, tvwgt, tpwgts2[2]; | ^~~~~ kvmetis.c:100:10: warning: unused variable 'j' [-Wunused-variable] 100 | int i, j, nvtxs, tvwgt, tpwgts2[2]; | ^ kvmetis.c:100:7: warning: unused variable 'i' [-Wunused-variable] 100 | int i, j, nvtxs, tvwgt, tpwgts2[2]; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c kwayfm.c -o kwayfm.o kwayfm.c: In function '__Random_KWayEdgeRefine': kwayfm.c:24:29: warning: unused variable 'l' [-Wunused-variable] 24 | int i, ii, iii, j, jj, k, l, pass, nvtxs, nmoves, nbnd, tvwgt, myndegrees; | ^ kwayfm.c:24:22: warning: unused variable 'jj' [-Wunused-variable] 24 | int i, ii, iii, j, jj, k, l, pass, nvtxs, nmoves, nbnd, tvwgt, myndegrees; | ^~ kwayfm.c: In function '__Greedy_KWayEdgeRefine': kwayfm.c:227:29: warning: unused variable 'l' [-Wunused-variable] 227 | int i, ii, iii, j, jj, k, l, pass, nvtxs, nbnd, tvwgt, myndegrees, oldgain, gain; | ^ kwayfm.c:227:22: warning: unused variable 'jj' [-Wunused-variable] 227 | int i, ii, iii, j, jj, k, l, pass, nvtxs, nbnd, tvwgt, myndegrees, oldgain, gain; | ^~ kwayfm.c: In function '__Greedy_KWayEdgeBalance': kwayfm.c:458:21: warning: variable 'oldcut' set but not used [-Wunused-but-set-variable] 458 | int from, me, to, oldcut, vwgt; | ^~~~~~ kwayfm.c:457:29: warning: unused variable 'l' [-Wunused-variable] 457 | int i, ii, iii, j, jj, k, l, pass, nvtxs, nbnd, tvwgt, myndegrees, oldgain, gain, nmoves; | ^ kwayfm.c:457:22: warning: unused variable 'jj' [-Wunused-variable] 457 | int i, ii, iii, j, jj, k, l, pass, nvtxs, nbnd, tvwgt, myndegrees, oldgain, gain, nmoves; | ^~ kwayfm.c:457:14: warning: unused variable 'iii' [-Wunused-variable] 457 | int i, ii, iii, j, jj, k, l, pass, nvtxs, nbnd, tvwgt, myndegrees, oldgain, gain, nmoves; | ^~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c kwayrefine.c -o kwayrefine.o kwayrefine.c: In function '__ComputeKWayPartitionParams': kwayrefine.c:147:16: warning: unused variable 'l' [-Wunused-variable] 147 | int i, j, k, l, nvtxs, nbnd, mincut, me, other; | ^ kwayrefine.c: In function '__IsBalanced': kwayrefine.c:335:10: warning: unused variable 'j' [-Wunused-variable] 335 | int i, j, tvwgt; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c kwayvolfm.c -o kwayvolfm.o kwayvolfm.c: In function '__Random_KWayVolRefine': kwayvolfm.c:28:35: warning: variable 'bndptr' set but not used [-Wunused-but-set-variable] 28 | idxtype *where, *pwgts, *perm, *bndptr, *bndind, *minwgt, *maxwgt, *itpwgts, *updind, *marker, *phtable; | ^~~~~~ kwayvolfm.c:27:28: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 27 | idxtype *xadj, *adjncy, *adjwgt; | ^~~~~~ kwayvolfm.c:27:19: warning: variable 'adjncy' set but not used [-Wunused-but-set-variable] 27 | idxtype *xadj, *adjncy, *adjwgt; | ^~~~~~ kwayvolfm.c:27:12: warning: variable 'xadj' set but not used [-Wunused-but-set-variable] 27 | idxtype *xadj, *adjncy, *adjwgt; | ^~~~ kwayvolfm.c:26:13: warning: unused variable 'me' [-Wunused-variable] 26 | int from, me, to, oldcut, oldvol, vwgt; | ^~ kwayvolfm.c:25:36: warning: unused variable 'u' [-Wunused-variable] 25 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^ kwayvolfm.c:25:33: warning: unused variable 'l' [-Wunused-variable] 25 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^ kwayvolfm.c:25:29: warning: unused variable 'kk' [-Wunused-variable] 25 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^~ kwayvolfm.c:25:22: warning: unused variable 'jj' [-Wunused-variable] 25 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^~ kwayvolfm.c: In function '__Random_KWayVolRefineMConn': kwayvolfm.c:172:35: warning: variable 'bndptr' set but not used [-Wunused-but-set-variable] 172 | idxtype *where, *pwgts, *perm, *bndptr, *bndind, *minwgt, *maxwgt, *itpwgts, *updind, *marker, *phtable; | ^~~~~~ kwayvolfm.c:169:36: warning: unused variable 'u' [-Wunused-variable] 169 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^ kwayvolfm.c:169:29: warning: unused variable 'kk' [-Wunused-variable] 169 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^~ kwayvolfm.c:169:22: warning: unused variable 'jj' [-Wunused-variable] 169 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^~ kwayvolfm.c: In function '__Greedy_KWayVolBalance': kwayvolfm.c:411:43: warning: variable 'bndptr' set but not used [-Wunused-but-set-variable] 411 | idxtype *where, *pwgts, *perm, *moved, *bndptr, *bndind, *minwgt, *maxwgt, *itpwgts, *updind, *marker, *phtable; | ^~~~~~ kwayvolfm.c:410:28: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 410 | idxtype *xadj, *adjncy, *adjwgt; | ^~~~~~ kwayvolfm.c:410:19: warning: variable 'adjncy' set but not used [-Wunused-but-set-variable] 410 | idxtype *xadj, *adjncy, *adjwgt; | ^~~~~~ kwayvolfm.c:410:12: warning: variable 'xadj' set but not used [-Wunused-but-set-variable] 410 | idxtype *xadj, *adjncy, *adjwgt; | ^~~~ kwayvolfm.c:409:27: warning: unused variable 'gain' [-Wunused-variable] 409 | int from, me, to, vwgt, gain; | ^~~~ kwayvolfm.c:409:13: warning: unused variable 'me' [-Wunused-variable] 409 | int from, me, to, vwgt, gain; | ^~ kwayvolfm.c:408:36: warning: unused variable 'u' [-Wunused-variable] 408 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^ kwayvolfm.c:408:33: warning: unused variable 'l' [-Wunused-variable] 408 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^ kwayvolfm.c:408:29: warning: unused variable 'kk' [-Wunused-variable] 408 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^~ kwayvolfm.c:408:22: warning: unused variable 'jj' [-Wunused-variable] 408 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^~ kwayvolfm.c:408:14: warning: unused variable 'iii' [-Wunused-variable] 408 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^~~ kwayvolfm.c: In function '__Greedy_KWayVolBalanceMConn': kwayvolfm.c:565:43: warning: variable 'bndptr' set but not used [-Wunused-but-set-variable] 565 | idxtype *where, *pwgts, *perm, *moved, *bndptr, *bndind, *minwgt, *maxwgt, *itpwgts, *updind, *marker, *phtable; | ^~~~~~ kwayvolfm.c:563:27: warning: unused variable 'gain' [-Wunused-variable] 563 | int from, me, to, vwgt, gain, maxndoms, nadd; | ^~~~ kwayvolfm.c:562:36: warning: unused variable 'u' [-Wunused-variable] 562 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^ kwayvolfm.c:562:29: warning: unused variable 'kk' [-Wunused-variable] 562 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^~ kwayvolfm.c:562:22: warning: unused variable 'jj' [-Wunused-variable] 562 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^~ kwayvolfm.c:562:14: warning: unused variable 'iii' [-Wunused-variable] 562 | int i, ii, iii, j, jj, k, kk, l, u, pass, nvtxs, nmoves, tvwgt, myndegrees, xgain; | ^~~ kwayvolfm.c: In function '__KWayVolUpdate': kwayvolfm.c:811:30: warning: unused variable 'l' [-Wunused-variable] 811 | int ii, iii, j, jj, k, kk, l, u, nupd, other, me, myidx; | ^ kwayvolfm.c:811:11: warning: unused variable 'iii' [-Wunused-variable] 811 | int ii, iii, j, jj, k, kk, l, u, nupd, other, me, myidx; | ^~~ kwayvolfm.c: In function '__ComputeKWayVolume': kwayvolfm.c:1095:36: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 1095 | idxtype *xadj, *vsize, *adjncy, *adjwgt, *where; | ^~~~~~ kwayvolfm.c:1094:50: warning: unused variable 'pid' [-Wunused-variable] 1094 | int ii, iii, i, j, k, kk, l, nvtxs, me, other, pid; | ^~~ kwayvolfm.c:1094:32: warning: variable 'nvtxs' set but not used [-Wunused-but-set-variable] 1094 | int ii, iii, i, j, k, kk, l, nvtxs, me, other, pid; | ^~~~~ kwayvolfm.c:1094:29: warning: unused variable 'l' [-Wunused-variable] 1094 | int ii, iii, i, j, k, kk, l, nvtxs, me, other, pid; | ^ kwayvolfm.c: In function '__ComputeVolume': kwayvolfm.c:1185:16: warning: unused variable 'me' [-Wunused-variable] 1185 | int i, j, k, me, nvtxs, nparts, totalv; | ^~ kwayvolfm.c: In function '__CheckVolKWayPartitionParams': kwayvolfm.c:1225:70: warning: unused variable 'bndptr' [-Wunused-variable] 1225 | idxtype *xadj, *vsize, *adjncy, *adjwgt, *pwgts, *where, *bndind, *bndptr; | ^~~~~~ kwayvolfm.c:1225:61: warning: unused variable 'bndind' [-Wunused-variable] 1225 | idxtype *xadj, *vsize, *adjncy, *adjwgt, *pwgts, *where, *bndind, *bndptr; | ^~~~~~ kwayvolfm.c:1225:45: warning: unused variable 'pwgts' [-Wunused-variable] 1225 | idxtype *xadj, *vsize, *adjncy, *adjwgt, *pwgts, *where, *bndind, *bndptr; | ^~~~~ kwayvolfm.c:1225:36: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 1225 | idxtype *xadj, *vsize, *adjncy, *adjwgt, *pwgts, *where, *bndind, *bndptr; | ^~~~~~ kwayvolfm.c:1224:48: warning: unused variable 'minvol' [-Wunused-variable] 1224 | int i, ii, j, k, kk, l, nvtxs, nbnd, mincut, minvol, me, other, pid; | ^~~~~~ kwayvolfm.c:1224:40: warning: unused variable 'mincut' [-Wunused-variable] 1224 | int i, ii, j, k, kk, l, nvtxs, nbnd, mincut, minvol, me, other, pid; | ^~~~~~ kwayvolfm.c:1224:34: warning: unused variable 'nbnd' [-Wunused-variable] 1224 | int i, ii, j, k, kk, l, nvtxs, nbnd, mincut, minvol, me, other, pid; | ^~~~ kwayvolfm.c:1224:24: warning: unused variable 'l' [-Wunused-variable] 1224 | int i, ii, j, k, kk, l, nvtxs, nbnd, mincut, minvol, me, other, pid; | ^ kwayvolfm.c: In function '__ComputeVolSubDomainGraph': kwayvolfm.c:1353:28: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 1353 | idxtype *xadj, *adjncy, *adjwgt, *where; | ^~~~~~ kwayvolfm.c:1353:19: warning: variable 'adjncy' set but not used [-Wunused-but-set-variable] 1353 | idxtype *xadj, *adjncy, *adjwgt, *where; | ^~~~~~ kwayvolfm.c:1353:12: warning: variable 'xadj' set but not used [-Wunused-but-set-variable] 1353 | idxtype *xadj, *adjncy, *adjwgt, *where; | ^~~~ kwayvolfm.c: In function 'EliminateVolComponents': kwayvolfm.c:1674:10: warning: 'me' may be used uninitialized [-Wmaybe-uninitialized] 1674 | if (where[k] == me && !touched[k]) { | ^ kwayvolfm.c:1625:24: note: 'me' was declared here 1625 | int i, ii, j, jj, k, me, nvtxs, tvwgt, first, last, nleft, ncmps, cwgt, ncand, other, target, deltawgt; | ^~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c kwayvolrefine.c -o kwayvolrefine.o kwayvolrefine.c: In function '__ComputeVolKWayPartitionParams': kwayvolrefine.c:138:30: warning: unused variable 'oedegrees' [-Wunused-variable] 138 | VEDegreeType *myedegrees, *oedegrees; | ^~~~~~~~~ kwayvolrefine.c:137:33: warning: unused variable 'orinfo' [-Wunused-variable] 137 | VRInfoType *rinfo, *myrinfo, *orinfo; | ^~~~~~ kwayvolrefine.c:135:67: warning: unused variable 'pid' [-Wunused-variable] 135 | int i, ii, j, k, kk, l, nvtxs, nbnd, mincut, minvol, me, other, pid; | ^~~ kwayvolrefine.c:135:48: warning: unused variable 'minvol' [-Wunused-variable] 135 | int i, ii, j, k, kk, l, nvtxs, nbnd, mincut, minvol, me, other, pid; | ^~~~~~ kwayvolrefine.c:135:34: warning: unused variable 'nbnd' [-Wunused-variable] 135 | int i, ii, j, k, kk, l, nvtxs, nbnd, mincut, minvol, me, other, pid; | ^~~~ kwayvolrefine.c:135:24: warning: unused variable 'l' [-Wunused-variable] 135 | int i, ii, j, k, kk, l, nvtxs, nbnd, mincut, minvol, me, other, pid; | ^ kwayvolrefine.c:135:20: warning: unused variable 'kk' [-Wunused-variable] 135 | int i, ii, j, k, kk, l, nvtxs, nbnd, mincut, minvol, me, other, pid; | ^~ kwayvolrefine.c:135:10: warning: unused variable 'ii' [-Wunused-variable] 135 | int i, ii, j, k, kk, l, nvtxs, nbnd, mincut, minvol, me, other, pid; | ^~ kwayvolrefine.c: In function '__ComputeKWayVolGains': kwayvolrefine.c:216:36: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 216 | idxtype *xadj, *vsize, *adjncy, *adjwgt, *where, *bndind, *bndptr, *ophtable; | ^~~~~~ kwayvolrefine.c:215:45: warning: unused variable 'pid' [-Wunused-variable] 215 | int i, ii, j, k, kk, l, nvtxs, me, other, pid, myndegrees; | ^~~ kwayvolrefine.c:215:24: warning: unused variable 'l' [-Wunused-variable] 215 | int i, ii, j, k, kk, l, nvtxs, me, other, pid, myndegrees; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c match.c -o match.o match.c: In function '__Match_RM': match.c:181:35: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 181 | idxtype *xadj, *vwgt, *adjncy, *adjwgt; | ^~~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mbalance.c -o mbalance.o mbalance.c: In function '__MocGeneral2WayBalance': mbalance.c:41:72: warning: unused variable 'me' [-Wunused-variable] 41 | int i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass, me, limit, tmp, cnum; | ^~ mbalance.c:41:66: warning: unused variable 'pass' [-Wunused-variable] 41 | int i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass, me, limit, tmp, cnum; | ^~~~ mbalance.c:41:20: warning: unused variable 'l' [-Wunused-variable] 41 | int i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass, me, limit, tmp, cnum; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mbalance2.c -o mbalance2.o mbalance2.c: In function '__MocBalance2Way2': mbalance2.c:27:7: warning: unused variable 'i' [-Wunused-variable] 27 | int i; | ^ mbalance2.c: In function '__MocGeneral2WayBalance2': mbalance2.c:42:72: warning: unused variable 'me' [-Wunused-variable] 42 | int i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass, me, limit, tmp, cnum; | ^~ mbalance2.c:42:66: warning: unused variable 'pass' [-Wunused-variable] 42 | int i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass, me, limit, tmp, cnum; | ^~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mcoarsen.c -o mcoarsen.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c memory.c -o memory.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mesh.c -o mesh.o mesh.c: In function 'GENDUALMETIS': mesh.c:79:39: warning: unused variable 'nedges' [-Wunused-variable] 79 | int i, j, jj, k, kk, kkk, l, m, n, nedges, mask; | ^~~~~~ mesh.c: In function '__TRINODALMETIS': mesh.c:174:36: warning: unused variable 'n' [-Wunused-variable] 174 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^ mesh.c:174:33: warning: unused variable 'm' [-Wunused-variable] 174 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^ mesh.c:174:30: warning: unused variable 'l' [-Wunused-variable] 174 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^ mesh.c:174:25: warning: unused variable 'kkk' [-Wunused-variable] 174 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^~~ mesh.c: In function '__TETNODALMETIS': mesh.c:223:36: warning: unused variable 'n' [-Wunused-variable] 223 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^ mesh.c:223:33: warning: unused variable 'm' [-Wunused-variable] 223 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^ mesh.c:223:30: warning: unused variable 'l' [-Wunused-variable] 223 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^ mesh.c:223:25: warning: unused variable 'kkk' [-Wunused-variable] 223 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^~~ mesh.c: In function '__HEXNODALMETIS': mesh.c:275:22: warning: missing braces around initializer [-Wmissing-braces] 275 | int table[8][3] = {1, 3, 4, | ^ | { } 276 | 0, 2, 5, | { } 277 | 1, 3, 6, | { } 278 | 0, 2, 7, | { } 279 | 0, 5, 7, | { } 280 | 1, 4, 6, | { } 281 | 2, 5, 7, | { } 282 | 3, 4, 6}; | { } mesh.c:272:36: warning: unused variable 'n' [-Wunused-variable] 272 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^ mesh.c:272:33: warning: unused variable 'm' [-Wunused-variable] 272 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^ mesh.c:272:30: warning: unused variable 'l' [-Wunused-variable] 272 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^ mesh.c:272:25: warning: unused variable 'kkk' [-Wunused-variable] 272 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^~~ mesh.c: In function 'QUADNODALMETIS': mesh.c:348:22: warning: missing braces around initializer [-Wmissing-braces] 348 | int table[4][2] = {1, 3, | ^ | { } 349 | 0, 2, | { } 350 | 1, 3, | { } 351 | 0, 2}; | { } mesh.c:345:36: warning: unused variable 'n' [-Wunused-variable] 345 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^ mesh.c:345:33: warning: unused variable 'm' [-Wunused-variable] 345 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^ mesh.c:345:30: warning: unused variable 'l' [-Wunused-variable] 345 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^ mesh.c:345:25: warning: unused variable 'kkk' [-Wunused-variable] 345 | int i, j, jj, k, kk, kkk, l, m, n, nedges; | ^~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c meshpart.c -o meshpart.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mfm.c -o mfm.o mfm.c: In function '__MocFM_2WayEdgeRefine': mfm.c:26:72: warning: unused variable 'me' [-Wunused-variable] 26 | int i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass, me, limit, tmp, cnum; | ^~ mfm.c:26:20: warning: unused variable 'l' [-Wunused-variable] 26 | int i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass, me, limit, tmp, cnum; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mfm2.c -o mfm2.o mfm2.c: In function '__MocFM_2WayEdgeRefine2': mfm2.c:30:26: warning: variable 'origdiff' set but not used [-Wunused-but-set-variable] 30 | float *nvwgt, *npwgts, origdiff[MAXNCON], origbal[MAXNCON], minbal[MAXNCON]; | ^~~~~~~~ mfm2.c:27:72: warning: unused variable 'me' [-Wunused-variable] 27 | int i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass, me, limit, tmp, cnum; | ^~ mfm2.c: In function '__IsBetter2wayBalance': mfm2.c:347:10: warning: unused variable 'j' [-Wunused-variable] 347 | int i, j; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mincover.c -o mincover.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c minitpart.c -o minitpart.o minitpart.c: In function '__MocInit2WayPartition': minitpart.c:26:7: warning: unused variable 'i' [-Wunused-variable] 26 | int i, dbglvl; | ^ minitpart.c: In function '__MocGrowBisection': minitpart.c:62:44: warning: unused variable 'mincut' [-Wunused-variable] 62 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^~~~~~ minitpart.c:62:29: warning: unused variable 'from' [-Wunused-variable] 62 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^~~~ minitpart.c:62:23: warning: unused variable 'ncon' [-Wunused-variable] 62 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^~~~ minitpart.c:62:13: warning: unused variable 'k' [-Wunused-variable] 62 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^ minitpart.c:62:10: warning: unused variable 'j' [-Wunused-variable] 62 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^ minitpart.c:62:7: warning: unused variable 'i' [-Wunused-variable] 62 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^ minitpart.c: In function '__MocRandomBisection': minitpart.c:110:48: warning: unused variable 'mincut' [-Wunused-variable] 110 | int i, ii, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs, qnum; | ^~~~~~ minitpart.c:110:33: warning: unused variable 'from' [-Wunused-variable] 110 | int i, ii, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs, qnum; | ^~~~ minitpart.c:110:17: warning: unused variable 'k' [-Wunused-variable] 110 | int i, ii, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs, qnum; | ^ minitpart.c:110:14: warning: unused variable 'j' [-Wunused-variable] 110 | int i, ii, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs, qnum; | ^ minitpart.c: In function '__MocInit2WayBalance': minitpart.c:183:72: warning: unused variable 'me' [-Wunused-variable] 183 | int i, ii, j, k, l, kwgt, nvtxs, nbnd, ncon, nswaps, from, to, pass, me, cnum, tmp; | ^~ minitpart.c:183:66: warning: unused variable 'pass' [-Wunused-variable] 183 | int i, ii, j, k, l, kwgt, nvtxs, nbnd, ncon, nswaps, from, to, pass, me, cnum, tmp; | ^~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c minitpart2.c -o minitpart2.o minitpart2.c: In function '__MocGrowBisection2': minitpart2.c:62:44: warning: unused variable 'mincut' [-Wunused-variable] 62 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^~~~~~ minitpart2.c:62:29: warning: unused variable 'from' [-Wunused-variable] 62 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^~~~ minitpart2.c:62:23: warning: unused variable 'ncon' [-Wunused-variable] 62 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^~~~ minitpart2.c:62:13: warning: unused variable 'k' [-Wunused-variable] 62 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^ minitpart2.c:62:10: warning: unused variable 'j' [-Wunused-variable] 62 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^ minitpart2.c:62:7: warning: unused variable 'i' [-Wunused-variable] 62 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^ minitpart2.c: In function '__MocGrowBisectionNew2': minitpart2.c:113:44: warning: unused variable 'mincut' [-Wunused-variable] 113 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^~~~~~ minitpart2.c:113:29: warning: unused variable 'from' [-Wunused-variable] 113 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^~~~ minitpart2.c:113:23: warning: unused variable 'ncon' [-Wunused-variable] 113 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^~~~ minitpart2.c:113:13: warning: unused variable 'k' [-Wunused-variable] 113 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^ minitpart2.c:113:10: warning: unused variable 'j' [-Wunused-variable] 113 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^ minitpart2.c:113:7: warning: unused variable 'i' [-Wunused-variable] 113 | int i, j, k, nvtxs, ncon, from, bestcut, mincut, nbfs; | ^ minitpart2.c: In function '__MocInit2WayBalance2': minitpart2.c:161:72: warning: unused variable 'me' [-Wunused-variable] 161 | int i, ii, j, k, l, kwgt, nvtxs, nbnd, ncon, nswaps, from, to, pass, me, cnum, tmp, imin; | ^~ minitpart2.c:161:66: warning: unused variable 'pass' [-Wunused-variable] 161 | int i, ii, j, k, l, kwgt, nvtxs, nbnd, ncon, nswaps, from, to, pass, me, cnum, tmp, imin; | ^~~~ minitpart2.c: In function '__SelectQueueOneWay2': minitpart2.c:356:26: warning: 'imax' may be used uninitialized [-Wmaybe-uninitialized] 356 | twgt[i] = (max/(ubvec[imax]*ubvec[i]))/pto[i]; | ^ minitpart2.c:345:19: note: 'imax' was declared here 345 | int i, cnum=-1, imax, maxgain; | ^~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mkmetis.c -o mkmetis.o mkmetis.c: In function 'METIS_mCPartGraphKway': mkmetis.c:31:10: warning: unused variable 'j' [-Wunused-variable] 31 | int i, j; | ^ mkmetis.c:31:7: warning: unused variable 'i' [-Wunused-variable] 31 | int i, j; | ^ mkmetis.c: In function '__MCMlevelKWayPartitioning': mkmetis.c:82:13: warning: unused variable 'nvtxs' [-Wunused-variable] 82 | int i, j, nvtxs; | ^~~~~ mkmetis.c:82:10: warning: unused variable 'j' [-Wunused-variable] 82 | int i, j, nvtxs; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mkwayfmh.c -o mkwayfmh.o mkwayfmh.c: In function '__MCRandom_KWayEdgeRefineHorizontal': mkwayfmh.c:25:29: warning: unused variable 'l' [-Wunused-variable] 25 | int i, ii, iii, j, jj, k, l, pass, nvtxs, ncon, nmoves, nbnd, myndegrees, same; | ^ mkwayfmh.c:25:22: warning: unused variable 'jj' [-Wunused-variable] 25 | int i, ii, iii, j, jj, k, l, pass, nvtxs, ncon, nmoves, nbnd, myndegrees, same; | ^~ mkwayfmh.c: In function '__MCGreedy_KWayEdgeBalanceHorizontal': mkwayfmh.c:267:21: warning: variable 'oldcut' set but not used [-Wunused-but-set-variable] 267 | int from, me, to, oldcut; | ^~~~~~ mkwayfmh.c:266:29: warning: unused variable 'l' [-Wunused-variable] 266 | int i, ii, iii, j, jj, k, l, pass, nvtxs, ncon, nbnd, myndegrees, oldgain, gain, nmoves; | ^ mkwayfmh.c:266:22: warning: unused variable 'jj' [-Wunused-variable] 266 | int i, ii, iii, j, jj, k, l, pass, nvtxs, ncon, nbnd, myndegrees, oldgain, gain, nmoves; | ^~ mkwayfmh.c:266:14: warning: unused variable 'iii' [-Wunused-variable] 266 | int i, ii, iii, j, jj, k, l, pass, nvtxs, ncon, nbnd, myndegrees, oldgain, gain, nmoves; | ^~~ mkwayfmh.c: In function '__IsHBalanceBetterFT': mkwayfmh.c:605:13: warning: unused variable 'k' [-Wunused-variable] 605 | int i, j, k; | ^ mkwayfmh.c:605:10: warning: unused variable 'j' [-Wunused-variable] 605 | int i, j, k; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mkwayrefine.c -o mkwayrefine.o mkwayrefine.c: In function '__MocComputeKWayPartitionParams': mkwayrefine.c:95:16: warning: unused variable 'l' [-Wunused-variable] 95 | int i, j, k, l, nvtxs, ncon, nbnd, mincut, me, other; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mmatch.c -o mmatch.o mmatch.c: In function '__MCMatch_RM': mmatch.c:28:28: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 28 | idxtype *xadj, *adjncy, *adjwgt; | ^~~~~~ mmatch.c: In function '__MCMatch_HEM': mmatch.c:84:20: warning: unused variable 'l' [-Wunused-variable] 84 | int i, ii, j, k, l, nvtxs, cnvtxs, ncon, maxidx, maxwgt; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mmd.c -o mmd.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mpmetis.c -o mpmetis.o mpmetis.c: In function 'METIS_mCPartGraphRecursive': mpmetis.c:31:10: warning: unused variable 'j' [-Wunused-variable] 31 | int i, j; | ^ mpmetis.c:31:7: warning: unused variable 'i' [-Wunused-variable] 31 | int i, j; | ^ mpmetis.c: In function 'METIS_mCHPartGraphRecursive': mpmetis.c:85:10: warning: unused variable 'j' [-Wunused-variable] 85 | int i, j; | ^ mpmetis.c:85:7: warning: unused variable 'i' [-Wunused-variable] 85 | int i, j; | ^ mpmetis.c: In function 'METIS_mCPartGraphRecursiveInternal': mpmetis.c:143:10: warning: unused variable 'j' [-Wunused-variable] 143 | int i, j; | ^ mpmetis.c:143:7: warning: unused variable 'i' [-Wunused-variable] 143 | int i, j; | ^ mpmetis.c: In function 'METIS_mCHPartGraphRecursiveInternal': mpmetis.c:191:10: warning: unused variable 'j' [-Wunused-variable] 191 | int i, j; | ^ mpmetis.c:191:7: warning: unused variable 'i' [-Wunused-variable] 191 | int i, j; | ^ mpmetis.c: In function '__MCMlevelRecursiveBisection': mpmetis.c:244:20: warning: unused variable 'ncon' [-Wunused-variable] 244 | int i, j, nvtxs, ncon, cut; | ^~~~ mpmetis.c:244:10: warning: unused variable 'j' [-Wunused-variable] 244 | int i, j, nvtxs, ncon, cut; | ^ mpmetis.c: In function '__MCHMlevelRecursiveBisection': mpmetis.c:296:10: warning: unused variable 'j' [-Wunused-variable] 296 | int i, j, nvtxs, ncon, cut; | ^ mpmetis.c: In function '__MCHMlevelEdgeBisection': mpmetis.c:388:7: warning: unused variable 'i' [-Wunused-variable] 388 | int i; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mrefine.c -o mrefine.o mrefine.c: In function '__MocCompute2WayPartitionParams': mrefine.c:102:11: warning: unused variable 'other' [-Wunused-variable] 102 | int me, other; | ^~~~~ mrefine.c:97:16: warning: unused variable 'l' [-Wunused-variable] 97 | int i, j, k, l, nvtxs, ncon, nbnd, mincut; | ^ mrefine.c:97:13: warning: unused variable 'k' [-Wunused-variable] 97 | int i, j, k, l, nvtxs, ncon, nbnd, mincut; | ^ mrefine.c: In function '__MocProject2WayPartition': mrefine.c:158:27: warning: variable 'ced' set but not used [-Wunused-but-set-variable] 158 | idxtype *cwhere, *cid, *ced, *cbndptr; | ^~~ mrefine.c:158:21: warning: variable 'cid' set but not used [-Wunused-but-set-variable] 158 | idxtype *cwhere, *cid, *ced, *cbndptr; | ^~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mrefine2.c -o mrefine2.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mutil.c -o mutil.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c myqsort.c -o myqsort.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c ometis.c -o ometis.o myqsort.c: In function 'siqst': myqsort.c:87:16: warning: unused variable 'ii' [-Wunused-variable] 87 | register int ii; | ^~ myqsort.c: In function 'iiqst': myqsort.c:217:16: warning: unused variable 'ii' [-Wunused-variable] 217 | register int ii; | ^~ ometis.c: In function 'METIS_EdgeND': ometis.c:27:10: warning: unused variable 'j' [-Wunused-variable] 27 | int i, j; | ^ ometis.c: In function 'METIS_NodeND': ometis.c:84:27: warning: unused variable 'nflag' [-Wunused-variable] 84 | int i, ii, j, l, wflag, nflag; | ^~~~~ ometis.c:84:20: warning: unused variable 'wflag' [-Wunused-variable] 84 | int i, ii, j, l, wflag, nflag; | ^~~~~ ometis.c: In function 'METIS_NodeWND': ometis.c:209:13: warning: unused variable 'tvwgt' [-Wunused-variable] 209 | int i, j, tvwgt; | ^~~~~ ometis.c:209:10: warning: unused variable 'j' [-Wunused-variable] 209 | int i, j, tvwgt; | ^ ometis.c: In function '__MlevelNestedDissection': ometis.c:267:10: warning: unused variable 'j' [-Wunused-variable] 267 | int i, j, nvtxs, nbnd, tvwgt, tpwgts2[2]; | ^ ometis.c: In function '__MlevelNestedDissectionCC': ometis.c:327:10: warning: unused variable 'j' [-Wunused-variable] 327 | int i, j, nvtxs, nbnd, tvwgt, tpwgts2[2], nsgraphs, ncmps, rnvtxs; | ^ ometis.c: In function '__MlevelNodeBisectionMultiple': ometis.c:391:33: warning: unused variable 'tmp' [-Wunused-variable] 391 | int i, nvtxs, cnvtxs, mincut, tmp; | ^~~ ometis.c: In function '__SplitGraphOrder': ometis.c:517:24: warning: unused variable 'auxadjwgt' [-Wunused-variable] 517 | idxtype *auxadjncy, *auxadjwgt; | ^~~~~~~~~ ometis.c:514:44: warning: variable 'adjwgtsum' set but not used [-Wunused-but-set-variable] 514 | idxtype *xadj, *vwgt, *adjncy, *adjwgt, *adjwgtsum, *label, *where, *bndptr, *bndind; | ^~~~~~~~~ ometis.c:514:35: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 514 | idxtype *xadj, *vwgt, *adjncy, *adjwgt, *adjwgtsum, *label, *where, *bndptr, *bndind; | ^~~~~~ ometis.c: In function '__MMDOrder': ometis.c:622:10: warning: unused variable 'j' [-Wunused-variable] 622 | int i, j, k, nvtxs, nofsub, firstvtx; | ^ ometis.c: In function '__SplitGraphOrderCC': ometis.c:672:24: warning: variable 'auxadjwgt' set but not used [-Wunused-but-set-variable] 672 | idxtype *auxadjncy, *auxadjwgt; | ^~~~~~~~~ ometis.c:669:44: warning: variable 'adjwgtsum' set but not used [-Wunused-but-set-variable] 669 | idxtype *xadj, *vwgt, *adjncy, *adjwgt, *adjwgtsum, *label, *where, *bndptr, *bndind; | ^~~~~~~~~ ometis.c:669:35: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 669 | idxtype *xadj, *vwgt, *adjncy, *adjwgt, *adjwgtsum, *label, *where, *bndptr, *bndind; | ^~~~~~ ometis.c:668:42: warning: unused variable 'mypart' [-Wunused-variable] 668 | int i, ii, iii, j, k, l, istart, iend, mypart, nvtxs, snvtxs, snedges; | ^~~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c parmetis.c -o parmetis.o parmetis.c: In function 'METIS_WPartGraphKway2': parmetis.c:48:10: warning: unused variable 'j' [-Wunused-variable] 48 | int i, j; | ^ parmetis.c:48:7: warning: unused variable 'i' [-Wunused-variable] 48 | int i, j; | ^ parmetis.c: In function 'METIS_NodeNDP': parmetis.c:98:27: warning: unused variable 'nflag' [-Wunused-variable] 98 | int i, ii, j, l, wflag, nflag; | ^~~~~ parmetis.c:98:20: warning: unused variable 'wflag' [-Wunused-variable] 98 | int i, ii, j, l, wflag, nflag; | ^~~~~ parmetis.c: In function '__MlevelNestedDissectionP': parmetis.c:196:10: warning: unused variable 'j' [-Wunused-variable] 196 | int i, j, nvtxs, nbnd, tvwgt, tpwgts2[2]; | ^ parmetis.c: In function 'METIS_NodeComputeSeparator': parmetis.c:265:10: warning: unused variable 'j' [-Wunused-variable] 265 | int i, j, tvwgt, tpwgts[2]; | ^ parmetis.c:265:7: warning: unused variable 'i' [-Wunused-variable] 265 | int i, j, tvwgt, tpwgts[2]; | ^ parmetis.c: In function 'METIS_EdgeComputeSeparator': parmetis.c:323:10: warning: unused variable 'j' [-Wunused-variable] 323 | int i, j, tvwgt, tpwgts[2]; | ^ parmetis.c:323:7: warning: unused variable 'i' [-Wunused-variable] 323 | int i, j, tvwgt, tpwgts[2]; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c pcg_basic.c -o pcg_basic.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c pmetis.c -o pmetis.o pmetis.c: In function 'METIS_WPartGraphRecursive': pmetis.c:52:10: warning: unused variable 'j' [-Wunused-variable] 52 | int i, j; | ^ pmetis.c: In function '__MlevelRecursiveBisection': pmetis.c:108:10: warning: unused variable 'j' [-Wunused-variable] 108 | int i, j, nvtxs, cut, tvwgt, tpwgts2[2]; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c pqueue.c -o pqueue.o pqueue.c: In function '__PQueueInsert': pqueue.c:143:13: warning: unused variable 'k' [-Wunused-variable] 143 | int i, j, k; | ^ pqueue.c: In function '__PQueueUpdate': pqueue.c:300:17: warning: unused variable 'newnode' [-Wunused-variable] 300 | ListNodeType *newnode; | ^~~~~~~ pqueue.c: In function '__CheckHeap': pqueue.c:558:17: warning: variable 'heap' set but not used [-Wunused-but-set-variable] 558 | KeyValueType *heap; | ^~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c refine.c -o refine.o refine.c: In function '__Compute2WayPartitionParams': refine.c:87:11: warning: unused variable 'other' [-Wunused-variable] 87 | int me, other; | ^~~~~ refine.c:83:16: warning: unused variable 'l' [-Wunused-variable] 83 | int i, j, k, l, nvtxs, nbnd, mincut; | ^ refine.c:83:13: warning: unused variable 'k' [-Wunused-variable] 83 | int i, j, k, l, nvtxs, nbnd, mincut; | ^ refine.c: In function '__Project2WayPartition': refine.c:143:27: warning: variable 'ced' set but not used [-Wunused-but-set-variable] 143 | idxtype *cwhere, *cid, *ced, *cbndptr; | ^~~ refine.c:143:21: warning: variable 'cid' set but not used [-Wunused-but-set-variable] 143 | idxtype *cwhere, *cid, *ced, *cbndptr; | ^~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c separator.c -o separator.o separator.c: In function '__ConstructSeparator': separator.c:26:13: warning: unused variable 'k' [-Wunused-variable] 26 | int i, j, k, nvtxs, nbnd; | ^ separator.c: In function '__ConstructMinCoverSeparator': separator.c:185:29: warning: variable 'bndptr' set but not used [-Wunused-but-set-variable] 185 | idxtype *where, *bndind, *bndptr, *vmap, *ivmap, *cover; | ^~~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c sfm.c -o sfm.o sfm.c: In function '__FM_2WayNodeBalance': sfm.c:929:7: warning: unused variable 'pass' [-Wunused-variable] 929 | int pass, to, other; | ^~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c srefine.c -o srefine.o srefine.c: In function '__Compute2WayNodePartitionParams': srefine.c:95:28: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 95 | idxtype *xadj, *adjncy, *adjwgt, *vwgt; | ^~~~~~ srefine.c:94:16: warning: unused variable 'l' [-Wunused-variable] 94 | int i, j, k, l, nvtxs, nbnd; | ^ srefine.c:94:13: warning: unused variable 'k' [-Wunused-variable] 94 | int i, j, k, l, nvtxs, nbnd; | ^ srefine.c: In function '__Project2WayNodePartition': srefine.c:149:10: warning: unused variable 'j' [-Wunused-variable] 149 | int i, j, nvtxs; | ^ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c stat.c -o stat.o stat.c: In function '__ComputePartitionInfo': stat.c:26:13: warning: unused variable 'k' [-Wunused-variable] 26 | int i, j, k, nvtxs, ncon, mustfree=0; | ^ stat.c: In function 'ComputePartitionInfoBipartite': stat.c:144:61: warning: unused variable 'tmpptr' [-Wunused-variable] 144 | idxtype *xadj, *adjncy, *vwgt, *vsize, *adjwgt, *kpwgts, *tmpptr; | ^~~~~~ stat.c:143:13: warning: unused variable 'k' [-Wunused-variable] 143 | int i, j, k, nvtxs, ncon, mustfree=0; | ^ stat.c: In function '__ComputePartitionBalance': stat.c:258:9: warning: unused variable 'balance' [-Wunused-variable] 258 | float balance; | ^~~~~~~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c subdomains.c -o subdomains.o subdomains.c: In function '__Random_KWayEdgeRefineMConn': subdomains.c:27:22: warning: unused variable 'jj' [-Wunused-variable] 27 | int i, ii, iii, j, jj, k, l, pass, nvtxs, nmoves, nbnd, tvwgt, myndegrees; | ^~ subdomains.c: In function '__Greedy_KWayEdgeBalanceMConn': subdomains.c:318:21: warning: variable 'oldcut' set but not used [-Wunused-but-set-variable] 318 | int from, me, to, oldcut, vwgt, maxndoms, nadd; | ^~~~~~ subdomains.c:317:22: warning: unused variable 'jj' [-Wunused-variable] 317 | int i, ii, iii, j, jj, k, l, pass, nvtxs, nbnd, tvwgt, myndegrees, oldgain, gain, nmoves; | ^~ subdomains.c:317:14: warning: unused variable 'iii' [-Wunused-variable] 317 | int i, ii, iii, j, jj, k, l, pass, nvtxs, nbnd, tvwgt, myndegrees, oldgain, gain, nmoves; | ^~~ subdomains.c: In function '__ComputeSubDomainGraph': subdomains.c:682:28: warning: variable 'adjwgt' set but not used [-Wunused-but-set-variable] 682 | idxtype *xadj, *adjncy, *adjwgt, *where; | ^~~~~~ subdomains.c:682:19: warning: variable 'adjncy' set but not used [-Wunused-but-set-variable] 682 | idxtype *xadj, *adjncy, *adjwgt, *where; | ^~~~~~ subdomains.c:682:12: warning: variable 'xadj' set but not used [-Wunused-but-set-variable] 682 | idxtype *xadj, *adjncy, *adjwgt, *where; | ^~~~ subdomains.c: In function '__MoveGroupMConn': subdomains.c:898:45: warning: unused variable 'myndegrees' [-Wunused-variable] 898 | int i, ii, iii, j, jj, k, l, nvtxs, nbnd, myndegrees; | ^~~~~~~~~~ subdomains.c:898:32: warning: variable 'nvtxs' set but not used [-Wunused-but-set-variable] 898 | int i, ii, iii, j, jj, k, l, nvtxs, nbnd, myndegrees; | ^~~~~ subdomains.c:898:29: warning: unused variable 'l' [-Wunused-variable] 898 | int i, ii, iii, j, jj, k, l, nvtxs, nbnd, myndegrees; | ^ subdomains.c:898:22: warning: unused variable 'jj' [-Wunused-variable] 898 | int i, ii, iii, j, jj, k, l, nvtxs, nbnd, myndegrees; | ^~ subdomains.c: In function '__EliminateComponents': subdomains.c:1053:75: warning: unused variable 'other' [-Wunused-variable] 1053 | int i, ii, j, jj, k, me, nvtxs, tvwgt, first, last, nleft, ncmps, cwgt, other, target, deltawgt; | ^~~~~ subdomains.c: In function '__MoveGroup': subdomains.c:1179:45: warning: unused variable 'myndegrees' [-Wunused-variable] 1179 | int i, ii, iii, j, jj, k, l, nvtxs, nbnd, myndegrees; | ^~~~~~~~~~ subdomains.c:1179:32: warning: variable 'nvtxs' set but not used [-Wunused-but-set-variable] 1179 | int i, ii, iii, j, jj, k, l, nvtxs, nbnd, myndegrees; | ^~~~~ subdomains.c:1179:29: warning: unused variable 'l' [-Wunused-variable] 1179 | int i, ii, iii, j, jj, k, l, nvtxs, nbnd, myndegrees; | ^ subdomains.c:1179:22: warning: unused variable 'jj' [-Wunused-variable] 1179 | int i, ii, iii, j, jj, k, l, nvtxs, nbnd, myndegrees; | ^~ subdomains.c: In function '__EliminateComponents': subdomains.c:1100:10: warning: 'me' may be used uninitialized [-Wmaybe-uninitialized] 1100 | if (where[k] == me && !touched[k]) { | ^ subdomains.c:1053:24: note: 'me' was declared here 1053 | int i, ii, j, jj, k, me, nvtxs, tvwgt, first, last, nleft, ncmps, cwgt, other, target, deltawgt; | ^~ gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c timing.c -o timing.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c util.c -o util.o util.c: In function '__RandomPermute': util.c:588:16: warning: unused variable 'v' [-Wunused-variable] 588 | int i, j, u, v; | ^ util.c:588:13: warning: unused variable 'u' [-Wunused-variable] 588 | int i, j, u, v; | ^ util.c: In function 'RandomInit': util.c:634:11: warning: unused variable 'tmp' [-Wunused-variable] 634 | idxtype tmp; | ^~~ g++-13 -std=gnu++17 -shared -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o BigQuic.so BigQuic_init.o RcppExports.o balance.o bigquic-run.o bigquic.o bucketsort.o ccgraph.o coarsen.o compress.o debug.o estmem.o fm.o fortran.o frename.o graph.o initpart.o kmetis.o kvmetis.o kwayfm.o kwayrefine.o kwayvolfm.o kwayvolrefine.o match.o mbalance.o mbalance2.o mcoarsen.o memory.o mesh.o meshpart.o mfm.o mfm2.o mincover.o minitpart.o minitpart2.o mkmetis.o mkwayfmh.o mkwayrefine.o mmatch.o mmd.o mpmetis.o mrefine.o mrefine2.o mutil.o myqsort.o ometis.o parmetis.o pcg_basic.o pmetis.o pqueue.o refine.o separator.o sfm.o srefine.o stat.o subdomains.o timing.o util.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -fopenmp make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/BigQuic/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/BigQuic/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/BigQuic/src' installing to /data/gannet/ripley/R/packages/tests-devel/BigQuic.Rcheck/00LOCK-BigQuic/00new/BigQuic/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BigQuic)