* installing *source* package ‘BTSR’ ... ** package ‘BTSR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (GCC) 13.2.0’ using Fortran compiler: ‘GNU Fortran (GCC) 13.2.0’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/BTSR/src' gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c 00_lbfgsb.f90 -o 00_lbfgsb.o 00_lbfgsb.f90:2855:30: 2855 | time, nseg, word, iback, stp, xstep, k, & | 1 Warning: Unused dummy argument 'iback' at (1) [-Wunused-dummy-argument] 00_lbfgsb.f90:2853:55: 2853 | subroutine prn3lb(n, x, f, task, iprint, info, itfile,& | 1 Warning: Unused dummy argument 'itfile' at (1) [-Wunused-dummy-argument] 00_lbfgsb.f90:2855:17: 2855 | time, nseg, word, iback, stp, xstep, k, & | 1 Warning: Unused dummy argument 'nseg' at (1) [-Wunused-dummy-argument] 00_lbfgsb.f90:2855:35: 2855 | time, nseg, word, iback, stp, xstep, k, & | 1 Warning: Unused dummy argument 'stp' at (1) [-Wunused-dummy-argument] 00_lbfgsb.f90:2855:23: 2855 | time, nseg, word, iback, stp, xstep, k, & | 1 Warning: Unused dummy argument 'word' at (1) [-Wunused-dummy-argument] 00_lbfgsb.f90:2855:42: 2855 | time, nseg, word, iback, stp, xstep, k, & | 1 Warning: Unused dummy argument 'xstep' at (1) [-Wunused-dummy-argument] 00_lbfgsb.f90:2283:41: 2283 | iwhere, wrk, updatd, cnstnd,iprint, iter) | 1 Warning: Unused dummy argument 'iprint' at (1) [-Wunused-dummy-argument] 00_lbfgsb.f90:4059:22: 4059 | temp = sngl(ttime) | ^ Warning: 'time1' may be used uninitialized [-Wmaybe-uninitialized] 00_lbfgsb.f90:509:53: 509 | real (dp) :: cpu1,cpu2,cachyt,sbtime,lnscht,time1,time2 | ^ note: 'time1' was declared here 00_lbfgsb.f90:4059:22: 4059 | temp = sngl(ttime) | ^ Warning: 'time2' may be used uninitialized [-Wmaybe-uninitialized] 00_lbfgsb.f90:509:59: 509 | real (dp) :: cpu1,cpu2,cachyt,sbtime,lnscht,time1,time2 | ^ note: 'time2' was declared here 00_lbfgsb.f90:4059:22: 4059 | temp = sngl(ttime) | ^ Warning: 'cpu2' may be used uninitialized [-Wmaybe-uninitialized] 00_lbfgsb.f90:509:26: 509 | real (dp) :: cpu1,cpu2,cachyt,sbtime,lnscht,time1,time2 | ^ note: 'cpu2' was declared here 00_lbfgsb.f90:1553:36: 1553 | t(nbreak) = tl/(-neggi) | ^ Warning: 'tl' may be used uninitialized [-Wmaybe-uninitialized] 00_lbfgsb.f90:1480:22: 1480 | real (dp) :: tu,tl,wmc,wmp,wmw,tj,tj0,neggi, f2_org | ^ note: 'tl' was declared here 00_lbfgsb.f90:1480:19: 1480 | real (dp) :: tu,tl,wmc,wmp,wmw,tj,tj0,neggi, f2_org | ^ Warning: 'tu' may be used uninitialized [-Wmaybe-uninitialized] gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c 00_main.f90 -o 00_main.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c 00_specfun.f90 -o 00_specfun.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c 01_Nelder.f90 -o 01_Nelder.o 01_Nelder.f90:168:34: 168 | character(len = 100) :: output | 1 Warning: Unused variable 'output' declared at (1) [-Wunused-variable] gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c 01_RNG.f90 -o 01_RNG.o 01_RNG.f90:834:2: 834 | call labelpr(' Kiss64 not avaliable. Using Kiss32 instead', -1) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] 01_RNG.f90:835:22: 835 | self%type = 3 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] 01_RNG.f90:836:2: 836 | self%initialize = .true. | 1 Warning: Nonconforming tab character at (1) [-Wtabs] 01_RNG.f90:837:2: 837 | fn_val = rng_uniform_kiss32(self) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] 01_RNG.f90:842:2: 842 | call labelpr(" L'Ecuyer's 1999 not avaliable. Using Mersenne Twister instead", -1) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] 01_RNG.f90:843:22: 843 | self%type = 2 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] 01_RNG.f90:844:2: 844 | self%initialize = .true. | 1 Warning: Nonconforming tab character at (1) [-Wtabs] 01_RNG.f90:845:2: 845 | fn_val = rng_uniform_mersenne(self) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] 01_RNG.f90:1649:21: 1649 | fn = 1.d0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] 01_RNG.f90:1650:34: 1650 | if(give_log) fn = 0.d0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] 01_RNG.f90:1678:56: 1678 | fn = exp(-stirlerr(x)-bd0(x,lambda))/sqrt(M_2PI*x) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] 01_RNG.f90:1679:12: 1679 | return | 1 Warning: Nonconforming tab character at (1) [-Wtabs] 01_RNG.f90:1524:2: 1524 | 30 continue | 1 Warning: Label 30 at (1) defined but not used [-Wunused-label] gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c 02_base.f90 -o 02_base.o 02_base.f90:2596:56: 2596 | subroutine Ed2llk_beta(m,n,n1,mut,i1,n2,nut,i2,E,argsD) | 1 Warning: Unused dummy argument 'argsd' at (1) [-Wunused-dummy-argument] 02_base.f90:2565:65: 2565 | mustar = digamma(mu(1)*nu(1)) - digamma((1.d0 - mu(1))*nu(1)) | ^ Warning: 'MEM[(real(kind=8)[0:D.6812] *)_138][0]' may be used uninitialized [-Wmaybe-uninitialized] 02_base.f90:2565:65: Warning: 'MEM[(real(kind=8)[0:D.6804] *)_142][0]' may be used uninitialized [-Wmaybe-uninitialized] gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c 03_barc.f90 -o 03_barc.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c 03_barfima.f90 -o 03_barfima.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c 03_karfima.f90 -o 03_karfima.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c 03_garfima.f90 -o 03_garfima.o gfortran-13 -fpic -g -O2 -mtune=native -Wall -pedantic -c 03_uwarfima.f90 -o 03_uwarfima.o gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c BTSR_init.c -o BTSR_init.o gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o BTSR.so 00_lbfgsb.o 00_main.o 00_specfun.o 01_Nelder.o 01_RNG.o 02_base.o 03_barc.o 03_barfima.o 03_karfima.o 03_garfima.o 03_uwarfima.o BTSR_init.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/BTSR/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/BTSR/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/BTSR/src' installing to /data/gannet/ripley/R/packages/tests-devel/BTSR.Rcheck/00LOCK-BTSR/00new/BTSR/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BTSR)