* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/tsDyn.Rcheck’ * using R Under development (unstable) (2024-04-24 r86484) * using platform: x86_64-pc-linux-gnu * R was compiled by clang version 18.1.4 flang-new version 18.1.4 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘tsDyn/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘tsDyn’ version ‘11.0.4.1’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘tsDyn’ can be installed ... [43s/61s] OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/tsDyn-00install.html' for details. * used C compiler: ‘clang version 18.1.4’ * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [91s/128s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [49s/62s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [6m/11m] OK Running ‘00SetarAndFriends.R’ [8s/12s] Comparing ‘00SetarAndFriends.Rout’ to ‘00SetarAndFriends.Rout.save’ ... OK Running ‘GIRF_TEST.R’ [34s/48s] Comparing ‘GIRF_TEST.Rout’ to ‘GIRF_TEST.Rout.save’ ... OK Running ‘TVAR_TEST.R’ [19s/25s] Comparing ‘TVAR_TEST.Rout’ to ‘TVAR_TEST.Rout.save’ ... OK Running ‘TVECM.sim.R’ Comparing ‘TVECM.sim.Rout’ to ‘TVECM.sim.Rout.save’ ... OK Running ‘TVECM_HSTEST.R’ Comparing ‘TVECM_HSTEST.Rout’ to ‘TVECM_HSTEST.Rout.save’ ... OK Running ‘VAR_TEST.R’ [8s/12s] Comparing ‘VAR_TEST.Rout’ to ‘VAR_TEST.Rout.save’ ... OK Running ‘VECM_TEST.R’ [13s/17s] Comparing ‘VECM_TEST.Rout’ to ‘VECM_TEST.Rout.save’ ... OK Running ‘compare_tsDyn_vars.R’ [8s/10s] Comparing ‘compare_tsDyn_vars.Rout’ to ‘compare_tsDyn_vars.Rout.save’ ... OK Running ‘irf_nlVAR_TEST.R’ [49s/62s] Comparing ‘irf_nlVAR_TEST.Rout’ to ‘irf_nlVAR_TEST.Rout.save’ ... OK Running ‘irf_nlar_TEST.R’ [31s/63s] Running ‘linear_TEST.R’ [6s/16s] Comparing ‘linear_TEST.Rout’ to ‘linear_TEST.Rout.save’ ... OK Running ‘lstar_TEST.R’ [15s/42s] Running ‘nlVar-methods_TEST.R’ [40s/105s] Comparing ‘nlVar-methods_TEST.Rout’ to ‘nlVar-methods_TEST.Rout.save’ ...5210,5257c5210,5213 < [1] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [2] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [3] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [4] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [5] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [6] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [7] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [8] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [9] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [10] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [11] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [12] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [13] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [14] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [15] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [16] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [17] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [18] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [19] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [20] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [21] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [22] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [23] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [24] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [25] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [26] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [27] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [28] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [29] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [30] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [31] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [32] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [33] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [34] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [35] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [36] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [37] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [38] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [39] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [40] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [41] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [42] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [43] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [44] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [45] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [46] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [47] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [48] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" --- > [1] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE > [16] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE > [31] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE > [46] TRUE TRUE TRUE Running ‘nlar-methods_TEST.R’ [34s/93s] Comparing ‘nlar-methods_TEST.Rout’ to ‘nlar-methods_TEST.Rout.save’ ... OK Running ‘regime.R’ [8s/21s] Comparing ‘regime.Rout’ to ‘regime.Rout.save’ ... OK Running ‘setar.sim_TEST.R’ [9s/26s] Comparing ‘setar.sim_TEST.Rout’ to ‘setar.sim_TEST.Rout.save’ ... OK Running ‘setarTest_test.R’ [18s/50s] Comparing ‘setarTest_test.Rout’ to ‘setarTest_test.Rout.save’ ... OK Running ‘toMlm.R’ [6s/16s] Comparing ‘toMlm.Rout’ to ‘toMlm.Rout.save’ ... OK Running ‘univ_ar_mean.R’ [7s/18s] Comparing ‘univ_ar_mean.Rout’ to ‘univ_ar_mean.Rout.save’ ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [43s/104s] OK * checking PDF version of manual ... [13s/25s] OK * checking HTML version of manual ... [7s/14s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: OK