* installing *source* package ‘sphereTessellation’ ...
** package ‘sphereTessellation’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 18.1.4’
using C++17
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/sphereTessellation/src'
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppCGAL/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DCGAL_HEADER_ONLY=1  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppCGAL/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DCGAL_HEADER_ONLY=1  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c delaunay.cpp -o delaunay.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppCGAL/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DCGAL_HEADER_ONLY=1  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c sphericalTriangle.cpp -o sphericalTriangle.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppCGAL/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DCGAL_HEADER_ONLY=1  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c utils.cpp -o utils.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppCGAL/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DCGAL_HEADER_ONLY=1  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c voronoi.cpp -o voronoi.o
In file included from RcppExports.cpp:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from RcppExports.cpp:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
In file included from RcppExports.cpp:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
   72 |                         Index replacements = 0;
      |                               ^
In file included from RcppExports.cpp:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  246 |   int count = 0;
      |       ^
5 warnings generated.
In file included from voronoi.cpp:1:
In file included from ./sphereTessellation.h:10:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Delaunay_triangulation_on_sphere_2.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2.h:26:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2/internal/arc_on_sphere_2_subsampling.h:22:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Eigen_solver_traits.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from delaunay.cpp:1:
In file included from ./sphereTessellation.h:10:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Delaunay_triangulation_on_sphere_2.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2.h:26:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2/internal/arc_on_sphere_2_subsampling.h:22:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Eigen_solver_traits.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from voronoi.cpp:1:
In file included from ./sphereTessellation.h:10:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Delaunay_triangulation_on_sphere_2.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2.h:26:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2/internal/arc_on_sphere_2_subsampling.h:22:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Eigen_solver_traits.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
In file included from delaunay.cpp:1:
In file included from ./sphereTessellation.h:10:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Delaunay_triangulation_on_sphere_2.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2.h:26:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2/internal/arc_on_sphere_2_subsampling.h:22:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Eigen_solver_traits.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
In file included from sphericalTriangle.cpp:1:
In file included from ./sphereTessellation.h:10:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Delaunay_triangulation_on_sphere_2.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2.h:26:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2/internal/arc_on_sphere_2_subsampling.h:22:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Eigen_solver_traits.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from sphericalTriangle.cpp:1:
In file included from ./sphereTessellation.h:10:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Delaunay_triangulation_on_sphere_2.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2.h:26:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2/internal/arc_on_sphere_2_subsampling.h:22:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Eigen_solver_traits.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
In file included from utils.cpp:1:
In file included from ./sphereTessellation.h:10:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Delaunay_triangulation_on_sphere_2.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2.h:26:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2/internal/arc_on_sphere_2_subsampling.h:22:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Eigen_solver_traits.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from utils.cpp:1:
In file included from ./sphereTessellation.h:10:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Delaunay_triangulation_on_sphere_2.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2.h:26:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Triangulation_on_sphere_2/internal/arc_on_sphere_2_subsampling.h:22:
In file included from /data/gannet/ripley/R/test-clang/RcppCGAL/include/CGAL/Eigen_solver_traits.h:20:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
3 warnings generated.
3 warnings generated.
3 warnings generated.
3 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o sphereTessellation.so RcppExports.o delaunay.o sphericalTriangle.o utils.o voronoi.o -lmpfr -lgmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/sphereTessellation/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/sphereTessellation/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/sphereTessellation/src'
installing to /data/gannet/ripley/R/packages/tests-clang/sphereTessellation.Rcheck/00LOCK-sphereTessellation/00new/sphereTessellation/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (sphereTessellation)