* installing *source* package ‘seqinr’ ...
** package ‘seqinr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/seqinr/src'
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DUSE_TYPE_CHECKING_STRICT -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c alignment.c -o alignment.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DUSE_TYPE_CHECKING_STRICT -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c fastacc.c -o fastacc.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DUSE_TYPE_CHECKING_STRICT -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c getzlibsock.c -o getzlibsock.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DUSE_TYPE_CHECKING_STRICT -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c kaks.c -o kaks.o
kaks.c:966:2: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
  966 |         for(i= 0; i<=20; i++) rl[0][i] = rl[i][0] = minrl;
      |         ^
kaks.c:962:1: note: previous statement is here
  962 | for(i=1; i<=20; i++)
      | ^
1 warning generated.
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DUSE_TYPE_CHECKING_STRICT -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c packagename_init.c -o packagename_init.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DUSE_TYPE_CHECKING_STRICT -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c util.c -o util.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DUSE_TYPE_CHECKING_STRICT -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c zsockr.c -o zsockr.o
/usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o seqinr.so alignment.o fastacc.o getzlibsock.o kaks.o packagename_init.o util.o zsockr.o -lz
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/seqinr/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/seqinr/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/seqinr/src'
installing to /data/gannet/ripley/R/packages/tests-clang/seqinr.Rcheck/00LOCK-seqinr/00new/seqinr/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (seqinr)