* installing *source* package ‘secsse’ ... ** package ‘secsse’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘clang version 18.1.4’ using C++17 make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/secsse/src' /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -D_HAS_AUTO_PTR_ETC=0 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c RcppExports.cpp -o RcppExports.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -D_HAS_AUTO_PTR_ETC=0 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c secsse_eval.cpp -o secsse_eval.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -D_HAS_AUTO_PTR_ETC=0 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c secsse_loglik.cpp -o secsse_loglik.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -D_HAS_AUTO_PTR_ETC=0 -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c secsse_sim.cpp -o secsse_sim.o In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:34: /data/gannet/ripley/R/test-clang/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21: /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:131: /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/linear_algebra.hpp:20: /data/gannet/ripley/R/test-clang/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/unscale.hpp:28: /data/gannet/ripley/R/test-clang/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:21: /data/gannet/ripley/R/test-clang/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:34: /data/gannet/ripley/R/test-clang/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21: /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:131: /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/linear_algebra.hpp:20: /data/gannet/ripley/R/test-clang/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/unscale.hpp:28: /data/gannet/ripley/R/test-clang/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20: /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:21: /data/gannet/ripley/R/test-clang/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:12: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:17: /data/gannet/ripley/R/test-clang/BH/include/boost/units/unit.hpp:73:10: warning: extension used [-Wlanguage-extension-token] 73 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/meter.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/scaled_base_unit.hpp:93:10: warning: extension used [-Wlanguage-extension-token] 93 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/meter.hpp:19: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/length.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:20: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/meter.hpp:41:10: warning: extension used [-Wlanguage-extension-token] 41 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:21: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/kilogram.hpp:15: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/cgs/gram.hpp:19: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/mass.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:21: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/kilogram.hpp:15: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/cgs/gram.hpp:41:10: warning: extension used [-Wlanguage-extension-token] 41 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:22: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/second.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/time.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:22: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/second.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/ampere.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/current.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:23: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/ampere.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:24: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/kelvin.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/temperature.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:24: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/kelvin.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/mole.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/amount.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:25: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/mole.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/candela.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/luminous_intensity.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:26: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/candela.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:27: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/angle/radian.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/plane_angle.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:27: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/angle/radian.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:28: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/angle/steradian.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/solid_angle.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_eval.cpp:13: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:28: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/angle/steradian.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:17: /data/gannet/ripley/R/test-clang/BH/include/boost/units/unit.hpp:73:10: warning: extension used [-Wlanguage-extension-token] 73 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/meter.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/scaled_base_unit.hpp:93:10: warning: extension used [-Wlanguage-extension-token] 93 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:20: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/meter.hpp:19: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/length.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:20: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/meter.hpp:41:10: warning: extension used [-Wlanguage-extension-token] 41 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:21: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/kilogram.hpp:15: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/cgs/gram.hpp:19: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/mass.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:21: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/kilogram.hpp:15: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/cgs/gram.hpp:41:10: warning: extension used [-Wlanguage-extension-token] 41 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:22: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/second.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/time.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:22: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/second.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/ampere.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/current.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:23: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/ampere.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:24: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/kelvin.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/temperature.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:24: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/kelvin.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:25: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/mole.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/amount.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:25: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/mole.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:26: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/candela.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/luminous_intensity.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:26: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/si/candela.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:27: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/angle/radian.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/plane_angle.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:27: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/angle/radian.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:28: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/angle/steradian.hpp:18: /data/gannet/ripley/R/test-clang/BH/include/boost/units/physical_dimensions/solid_angle.hpp:32:10: warning: extension used [-Wlanguage-extension-token] 32 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from secsse_loglik.cpp:14: In file included from ./secsse_loglik.h:13: In file included from ./odeint.h:23: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/dimensionless.hpp:14: In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/systems/si/base.hpp:28: /data/gannet/ripley/R/test-clang/BH/include/boost/units/base_units/angle/steradian.hpp:40:10: warning: extension used [-Wlanguage-extension-token] 40 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ 28 warnings generated. 28 warnings generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o secsse.so RcppExports.o secsse_eval.o secsse_loglik.o secsse_sim.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/secsse/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/secsse/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/secsse/src' installing to /data/gannet/ripley/R/packages/tests-clang/secsse.Rcheck/00LOCK-secsse/00new/secsse/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (secsse)