Install log for 'scrypt'

* installing *source* package ‘scrypt’ ...
** package ‘scrypt’ successfully unpacked and MD5 sums checked
** using staged installation
+ : /data/gannet/ripley/R/R-clang
+ test -z /data/gannet/ripley/R/R-clang
++ /data/gannet/ripley/R/R-clang/bin/R CMD config CC
+ CC=/usr/local/clang18/bin/clang
++ /data/gannet/ripley/R/R-clang/bin/R CMD config CFLAGS
+ CFLAGS='-O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3'
++ /data/gannet/ripley/R/R-clang/bin/R CMD config CPPFLAGS
+ CPPFLAGS='-isystem /usr/local/clang18/include -I/usr/local/clang/include'
+ export CC
+ export CFLAGS
+ export CPPFLAGS
+ cd src/scrypt-1.1.6/
+ chmod +x ./configure
+ cd src/scrypt-1.1.6/
+ ./configure
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for gcc... /usr/local/clang18/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether /usr/local/clang18/bin/clang accepts -g... yes
checking for /usr/local/clang18/bin/clang option to enable C11 features... none needed
checking whether /usr/local/clang18/bin/clang understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of /usr/local/clang18/bin/clang... gcc3
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for err.h... yes
checking for sys/endian.h... no
checking for sys/sysinfo.h... yes
checking for clock_gettime in -lrt... yes
checking for clock_gettime... yes
checking for sysinfo... yes
checking for posix_memalign... yes
checking for struct sysinfo... yes
checking for struct sysinfo.mem_unit... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config.h
config.status: executing depfiles commands
** libs
using C++ compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/scrypt/src'
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I./scrypt-1.1.6/ -I./scrypt-1.1.6/lib -I./scrypt-1.1.6/lib/util -DHAVE_CONFIG_H -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c scrypt-1.1.6/lib/crypto/sha256.c -o scrypt-1.1.6/lib/crypto/sha256.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I./scrypt-1.1.6/ -I./scrypt-1.1.6/lib -I./scrypt-1.1.6/lib/util -DHAVE_CONFIG_H -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c scrypt-1.1.6/lib/crypto/crypto_scrypt-ref.c -o scrypt-1.1.6/lib/crypto/crypto_scrypt-ref.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I./scrypt-1.1.6/ -I./scrypt-1.1.6/lib -I./scrypt-1.1.6/lib/util -DHAVE_CONFIG_H -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I./scrypt-1.1.6/ -I./scrypt-1.1.6/lib -I./scrypt-1.1.6/lib/util -DHAVE_CONFIG_H -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c scrypt.cpp -o scrypt.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I./scrypt-1.1.6/ -I./scrypt-1.1.6/lib -I./scrypt-1.1.6/lib/util -DHAVE_CONFIG_H -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c base64.cpp -o base64.o
scrypt.cpp:197:9: warning: unused variable 'logN' [-Wunused-variable]
  197 |     int logN=0;
      |         ^~~~
1 warning generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I./scrypt-1.1.6/ -I./scrypt-1.1.6/lib -I./scrypt-1.1.6/lib/util -DHAVE_CONFIG_H -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c util.cpp -o util.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o scrypt.so scrypt-1.1.6/lib/crypto/sha256.o scrypt-1.1.6/lib/crypto/crypto_scrypt-ref.o RcppExports.o scrypt.o base64.o util.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/scrypt/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/scrypt/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/scrypt/src'
installing to /data/gannet/ripley/R/packages/tests-clang/scrypt.Rcheck/00LOCK-scrypt/00new/scrypt/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (scrypt)