- using R Under development (unstable) (2024-04-24 r86484)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 18.1.4
flang-new version 18.1.4
- running under: Fedora Linux 36 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘rchemo/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘rchemo’ version ‘0.1-1’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘rchemo’ can be installed ... [14s/16s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking whether startup messages can be suppressed ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [30s/36s] OK
- checking Rd files ... NOTE
checkRd: (-1) aicplsr.Rd:35: Lost braces
35 | \item{correct}{Logical. If code{TRUE} (default), the AICc corection is applied to the criteria.}
| ^
checkRd: (-1) knnda.Rd:53: Lost braces
53 | For \code{knnda}{list with input arguments}
| ^
checkRd: (-1) knnr.Rd:53: Lost braces
53 | For \code{knnr}{list with input arguments}
| ^
checkRd: (-1) plsda_agg.Rd:59: Lost braces
59 | the model((\code{fm})=(\code{T}): X-scores matrix; (\code{P}): X-loading matrix;(\code{R}): The PLS projection matrix (p,nlv); (\code{W}): X-loading weights matrix ;(\code{C}): The Y-loading weights matrix; (\code{TT}): the X-score normalization factor; (\code{xmeans}): the centering vector of X (p,1); (\code{ymeans}): the centering vector of Y (q,1); (\code{weights}): vector of observation weights; (\code{U}): intermediate output), \code{lev}{classes}, \code{ni}{number of observations in each class}}
| ^
checkRd: (-1) plsda_agg.Rd:59: Lost braces
59 | the model((\code{fm})=(\code{T}): X-scores matrix; (\code{P}): X-loading matrix;(\code{R}): The PLS projection matrix (p,nlv); (\code{W}): X-loading weights matrix ;(\code{C}): The Y-loading weights matrix; (\code{TT}): the X-score normalization factor; (\code{xmeans}): the centering vector of X (p,1); (\code{ymeans}): the centering vector of Y (q,1); (\code{weights}): vector of observation weights; (\code{U}): intermediate output), \code{lev}{classes}, \code{ni}{number of observations in each class}}
| ^
checkRd: (-1) xfit.Rd:44: Lost braces
44 | For \code{xfit}{matrix of fitted values}
| ^
checkRd: (-1) xfit.Rd:46: Lost braces
46 | For \code{xresid}{matrix of residuals}
| ^
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [18s/22s] OK
- checking PDF version of manual ... [14s/19s] OK
- checking HTML version of manual ... [8s/12s] OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 NOTE