* installing *source* package ‘pyinit’ ...
** package ‘pyinit’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/pyinit/src'
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -D__STDC_LIMIT_MACROS  -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c AuxMemory.c -o AuxMemory.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -D__STDC_LIMIT_MACROS  -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c PartialSort.c -o PartialSort.o
In file included from PartialSort.c:10:
In file included from ./BLAS.h:19:
/data/gannet/ripley/R/R-clang/include/R_ext/BLAS.h:57:10: warning: 'BLAS_INT' macro redefined [-Wmacro-redefined]
   57 | # define BLAS_INT int
      |          ^
./BLAS.h:13:9: note: previous definition is here
   13 | #define BLAS_INT const int
      |         ^
1 warning generated.
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -D__STDC_LIMIT_MACROS  -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c evd.c -o evd.o
In file included from evd.c:9:
In file included from ./BLAS.h:19:
/data/gannet/ripley/R/R-clang/include/R_ext/BLAS.h:57:10: warning: 'BLAS_INT' macro redefined [-Wmacro-redefined]
   57 | # define BLAS_INT int
      |          ^
./BLAS.h:13:9: note: previous definition is here
   13 | #define BLAS_INT const int
      |         ^
1 warning generated.
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -D__STDC_LIMIT_MACROS  -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c fastPY.c -o fastPY.o
In file included from fastPY.c:9:
In file included from ./BLAS.h:19:
/data/gannet/ripley/R/R-clang/include/R_ext/BLAS.h:57:10: warning: 'BLAS_INT' macro redefined [-Wmacro-redefined]
   57 | # define BLAS_INT int
      |          ^
./BLAS.h:13:9: note: previous definition is here
   13 | #define BLAS_INT const int
      |         ^
1 warning generated.
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -D__STDC_LIMIT_MACROS  -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c mscale.c -o mscale.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -D__STDC_LIMIT_MACROS  -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c olsreg.c -o olsreg.o
In file included from olsreg.c:9:
In file included from ./BLAS.h:19:
/data/gannet/ripley/R/R-clang/include/R_ext/BLAS.h:57:10: warning: 'BLAS_INT' macro redefined [-Wmacro-redefined]
   57 | # define BLAS_INT int
      |          ^
./BLAS.h:13:9: note: previous definition is here
   13 | #define BLAS_INT const int
      |         ^
1 warning generated.
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -D__STDC_LIMIT_MACROS  -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c psc.c -o psc.o
In file included from psc.c:9:
In file included from ./BLAS.h:19:
/data/gannet/ripley/R/R-clang/include/R_ext/BLAS.h:57:10: warning: 'BLAS_INT' macro redefined [-Wmacro-redefined]
   57 | # define BLAS_INT int
      |          ^
./BLAS.h:13:9: note: previous definition is here
   13 | #define BLAS_INT const int
      |         ^
1 warning generated.
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -D__STDC_LIMIT_MACROS  -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c rinterface.c -o rinterface.o
/usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o pyinit.so AuxMemory.o PartialSort.o evd.o fastPY.o mscale.o olsreg.o psc.o rinterface.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortran_main -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/pyinit/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/pyinit/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/pyinit/src'
installing to /data/gannet/ripley/R/packages/tests-clang/pyinit.Rcheck/00LOCK-pyinit/00new/pyinit/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (pyinit)