* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/psp.Rcheck’
* using R Under development (unstable) (2024-04-24 r86484)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 18.1.4
    flang-new version 18.1.4
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘psp/DESCRIPTION’ ... OK
* this is package ‘psp’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘psp’ can be installed ... [58s/55s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/psp-00install.html' for details.
* used C++ compiler: ‘clang version 18.1.4’
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [7s/11s] OK
* checking Rd files ... NOTE
checkRd: (-1) pspGlobal.Rd:65-67: Lost braces
    65 |     \code{population}{The number of parameter sets in each ordinal region,
       |                      ^
checkRd: (-1) pspGlobal.Rd:68: Lost braces
    68 |     \code{iterations}{The number of global iterations. It has to be an integer. If emph{population} is not set or the regions have population less then the upper bound on their size, the function will stop after the set number of \emph{iterations}.}
       |                      ^
checkRd: (-1) pspGlobal.Rd:68: Lost braces
    68 |     \code{iterations}{The number of global iterations. It has to be an integer. If emph{population} is not set or the regions have population less then the upper bound on their size, the function will stop after the set number of \emph{iterations}.}
       |                                                                                        ^
checkRd: (-1) pspGlobal.Rd:69-71: Lost braces
    69 |     \code{lower, upper}{Vectors specifiying the lower and upper boundaries of
       |                        ^
checkRd: (-1) pspGlobal.Rd:72-74: Lost braces
    72 |     \code{init}{A marix of parameters to use as the first jumping distribution. 
       |                ^
checkRd: (-1) pspGlobal.Rd:75-76: Lost braces
    75 |     \code{radius}{The radius of the hypershere with n-dimensions to sample from.
       |                  ^
checkRd: (-1) pspGlobal.Rd:77-79: Lost braces
    77 |     \code{parameter_names}{A character vector that includes the names of each parameter.
       |                           ^
checkRd: (-1) pspGlobal.Rd:80-83: Lost braces
    80 |     \code{dimensionality}{A single integer that specifies the number of
       |                          ^
checkRd: (-1) pspGlobal.Rd:84-85: Lost braces
    84 |     \code{responses}{It is an integer that specifies the number of continuous
       |                     ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [48s/63s] OK
  Running ‘testthat.R’ [48s/62s]
* checking PDF version of manual ... [7s/11s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE