* installing *source* package ‘profoc’ ... ** package ‘profoc’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/profoc/src' /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/splines2/include' -I'/data/gannet/ripley/R/test-clang/rcpptimer/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -I../inst/include -I../inst/include/optim -DRCPP_ARMADILLO_FIX_Field -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c RcppExports.cpp -o RcppExports.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/splines2/include' -I'/data/gannet/ripley/R/test-clang/rcpptimer/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -I../inst/include -I../inst/include/optim -DRCPP_ARMADILLO_FIX_Field -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c batch.cpp -o batch.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/splines2/include' -I'/data/gannet/ripley/R/test-clang/rcpptimer/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -I../inst/include -I../inst/include/optim -DRCPP_ARMADILLO_FIX_Field -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c conline.cpp -o conline.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/splines2/include' -I'/data/gannet/ripley/R/test-clang/rcpptimer/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -I../inst/include -I../inst/include/optim -DRCPP_ARMADILLO_FIX_Field -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c conline_exports.cpp -o conline_exports.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/splines2/include' -I'/data/gannet/ripley/R/test-clang/rcpptimer/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -I../inst/include -I../inst/include/optim -DRCPP_ARMADILLO_FIX_Field -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c loss.cpp -o loss.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/splines2/include' -I'/data/gannet/ripley/R/test-clang/rcpptimer/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -I../inst/include -I../inst/include/optim -DRCPP_ARMADILLO_FIX_Field -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c misc.cpp -o misc.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/splines2/include' -I'/data/gannet/ripley/R/test-clang/rcpptimer/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -I../inst/include -I../inst/include/optim -DRCPP_ARMADILLO_FIX_Field -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c oracle.cpp -o oracle.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/splines2/include' -I'/data/gannet/ripley/R/test-clang/rcpptimer/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -I../inst/include -I../inst/include/optim -DRCPP_ARMADILLO_FIX_Field -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c profoc_types.cpp -o profoc_types.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/splines2/include' -I'/data/gannet/ripley/R/test-clang/rcpptimer/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -I../inst/include -I../inst/include/optim -DRCPP_ARMADILLO_FIX_Field -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c splines.cpp -o splines.o In file included from oracle.cpp:9: In file included from ../inst/include/optim/optim.hpp:44: ../inst/include/optim/unconstrained/bfgs.hpp:105:15: warning: unused variable 'print_level' [-Wunused-variable] 105 | const int print_level = settings.print_level; | ^~~~~~~~~~~ In file included from oracle.cpp:9: In file included from ../inst/include/optim/optim.hpp:45: ../inst/include/optim/unconstrained/lbfgs.hpp:141:15: warning: unused variable 'print_level' [-Wunused-variable] 141 | const int print_level = settings.print_level; | ^~~~~~~~~~~ In file included from oracle.cpp:9: In file included from ../inst/include/optim/optim.hpp:46: ../inst/include/optim/unconstrained/newton.hpp:106:15: warning: unused variable 'print_level' [-Wunused-variable] 106 | const int print_level = settings.print_level; | ^~~~~~~~~~~ In file included from oracle.cpp:9: In file included from ../inst/include/optim/optim.hpp:47: ../inst/include/optim/unconstrained/cg.hpp:195:15: warning: unused variable 'print_level' [-Wunused-variable] 195 | const int print_level = settings.print_level; | ^~~~~~~~~~~ In file included from oracle.cpp:9: In file included from ../inst/include/optim/optim.hpp:48: ../inst/include/optim/unconstrained/gd.hpp:107:15: warning: unused variable 'print_level' [-Wunused-variable] 107 | const int print_level = settings.print_level; | ^~~~~~~~~~~ In file included from oracle.cpp:9: In file included from ../inst/include/optim/optim.hpp:49: ../inst/include/optim/unconstrained/de.hpp:102:15: warning: unused variable 'print_level' [-Wunused-variable] 102 | const int print_level = settings.print_level; | ^~~~~~~~~~~ In file included from oracle.cpp:9: In file included from ../inst/include/optim/optim.hpp:50: ../inst/include/optim/unconstrained/de_prmm.hpp:103:15: warning: unused variable 'print_level' [-Wunused-variable] 103 | const int print_level = settings.print_level; | ^~~~~~~~~~~ In file included from oracle.cpp:9: In file included from ../inst/include/optim/optim.hpp:51: ../inst/include/optim/unconstrained/nm.hpp:169:12: warning: variable 'min_val' set but not used [-Wunused-but-set-variable] 169 | double min_val = OPTIM_MATOPS_MIN_VAL(simplex_fn_vals); | ^ In file included from oracle.cpp:9: In file included from ../inst/include/optim/optim.hpp:52: ../inst/include/optim/unconstrained/pso.hpp:103:15: warning: unused variable 'print_level' [-Wunused-variable] 103 | const int print_level = settings.print_level; | ^~~~~~~~~~~ In file included from oracle.cpp:9: In file included from ../inst/include/optim/optim.hpp:53: ../inst/include/optim/unconstrained/pso_dv.hpp:103:15: warning: unused variable 'print_level' [-Wunused-variable] 103 | const int print_level = settings.print_level; | ^~~~~~~~~~~ In file included from oracle.cpp:9: In file included from ../inst/include/optim/optim.hpp:59: ../inst/include/optim/zeros/broyden.hpp:164:15: warning: unused variable 'print_level' [-Wunused-variable] 164 | const int print_level = settings.print_level; | ^~~~~~~~~~~ ../inst/include/optim/zeros/broyden.hpp:302:15: warning: unused variable 'print_level' [-Wunused-variable] 302 | const int print_level = settings.print_level; | ^~~~~~~~~~~ In file included from oracle.cpp:9: In file included from ../inst/include/optim/optim.hpp:60: ../inst/include/optim/zeros/broyden_df.hpp:217:15: warning: unused variable 'print_level' [-Wunused-variable] 217 | const int print_level = settings.print_level; | ^~~~~~~~~~~ ../inst/include/optim/zeros/broyden_df.hpp:390:15: warning: unused variable 'print_level' [-Wunused-variable] 390 | const int print_level = settings.print_level; | ^~~~~~~~~~~ 14 warnings generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o profoc.so RcppExports.o batch.o conline.o conline_exports.o loss.o misc.o oracle.o profoc_types.o splines.o -fopenmp -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortran_main -lFortranRuntime -lFortranDecimal -lm make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/profoc/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/profoc/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/profoc/src' installing to /data/gannet/ripley/R/packages/tests-clang/profoc.Rcheck/00LOCK-profoc/00new/profoc/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (profoc)