* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/openalexR.Rcheck’ * using R Under development (unstable) (2024-05-02 r86508) * using platform: x86_64-pc-linux-gnu * R was compiled by clang version 18.1.5 flang-new version 18.1.5 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘openalexR/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘openalexR’ version ‘1.2.3’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘openalexR’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/openalexR-00install.html' for details. * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [10s/27s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... ERROR Running examples in ‘openalexR-Ex.R’ failed The error most likely occurred in: > ### Name: show_authors > ### Title: Simplify the OpenAlex authors result > ### Aliases: show_authors > > ### ** Examples > > > show_authors(oa_fetch( + identifier = c("A5023888391", "A5014077037"), + verbose = TRUE + )) Requesting url: https://api.openalex.org/authors?filter=openalex%3AA5023888391%7CA5014077037 Getting 1 page of results with a total of 2 records... Error in if (is.na(sub_affiliation[[1]])) { : the condition has length > 1 Calls: show_authors ... vapply -> oa_fetch -> do.call -> lapply -> FUN -> authors2df Execution halted * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [4s/16s] OK Running ‘testthat.R’ [4s/15s] * checking PDF version of manual ... [8s/35s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR