* installing *source* package ‘npsp’ ...
** package ‘npsp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 18.1.4’
using Fortran compiler: ‘flang-new version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/npsp/src'
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tql2.f90 -o tql2.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  err_module.f90 -o err_module.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c dgelsyr.f -o dgelsyr.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  grid_module.f90 -o grid_module.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c init.c -o init.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  linearalgebra.f90 -o linearalgebra.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  linreg_module.f90 -o linreg_module.o
./linreg_module.f90:84:11: warning: Reference to the procedure 'dgelsyr' has an implicit interface that is distinct from another reference: incompatible dummy argument #11: incompatible dummy data object shapes
            CALL DGELSYR( NRL, NINDRL, 1, RRL, LDXRL, BRL, LDXRL, JPVTRL,  & 
            ^
./linreg_module.f90:41:11: previous reference to 'dgelsyr'
            CALL DGELSYR( LDXRL, NINDRL, 1, RRL, LDXRL, BRL, LDXRL, JPVTRL,  & 
            ^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  besselzeros.f90 -o besselzeros.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  dsytrfi.f90 -o dsytrfi.o
./dsytrfi.f90:27:7: warning: Reference to the procedure 'dsytrf' has an implicit interface that is distinct from another reference: incompatible dummy argument #6: incompatible dummy data object shapes
        CALL DSYTRF( 'U', N, AI, N, IPIV, WORK, LWORK, INFO )
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./dsytrfi.f90:23:7: previous reference to 'dsytrf'
        CALL DSYTRF( 'U', N, AI, N, IPIV, tmp, LWORK, INFO )
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  lp_module.f90 -o lp_module.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  svar_module.f90 -o svar_module.o
/usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o npsp.so besselzeros.o dgelsyr.o dsytrfi.o err_module.o grid_module.o init.o linearalgebra.o linreg_module.o lp_module.o svar_module.o tql2.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortran_main -lFortranRuntime -lFortranDecimal -lm -lFortran_main -lFortranRuntime -lFortranDecimal -lm
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/npsp/src'
make[2]: Nothing to be done for 'npsp.so'.
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/npsp/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/npsp/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/npsp/src'
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tql2.f90 -o tql2.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  err_module.f90 -o err_module.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c dgelsyr.f -o dgelsyr.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  dsytrfi.f90 -o dsytrfi.o
./dsytrfi.f90:27:7: warning: Reference to the procedure 'dsytrf' has an implicit interface that is distinct from another reference: incompatible dummy argument #6: incompatible dummy data object shapes
        CALL DSYTRF( 'U', N, AI, N, IPIV, WORK, LWORK, INFO )
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./dsytrfi.f90:23:7: previous reference to 'dsytrf'
        CALL DSYTRF( 'U', N, AI, N, IPIV, tmp, LWORK, INFO )
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  grid_module.f90 -o grid_module.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c init.c -o init.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  linearalgebra.f90 -o linearalgebra.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  linreg_module.f90 -o linreg_module.o
./linreg_module.f90:84:11: warning: Reference to the procedure 'dgelsyr' has an implicit interface that is distinct from another reference: incompatible dummy argument #11: incompatible dummy data object shapes
            CALL DGELSYR( NRL, NINDRL, 1, RRL, LDXRL, BRL, LDXRL, JPVTRL,  & 
            ^
./linreg_module.f90:41:11: previous reference to 'dgelsyr'
            CALL DGELSYR( LDXRL, NINDRL, 1, RRL, LDXRL, BRL, LDXRL, JPVTRL,  & 
            ^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  besselzeros.f90 -o besselzeros.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  lp_module.f90 -o lp_module.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  svar_module.f90 -o svar_module.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/npsp/src'
installing to /data/gannet/ripley/R/packages/tests-clang/npsp.Rcheck/00LOCK-npsp/00new/npsp/libs
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (npsp)