* installing *source* package ‘mritc’ ...
** package ‘mritc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/mritc/src'
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c getDenSubBias_omp.c -o getDenSubBias_omp.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c getDenSub_omp.c -o getDenSub_omp.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c updateBiasInde_omp.c -o updateBiasInde_omp.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c updateBiasWeights_omp.c -o updateBiasWeights_omp.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c updateCounts.c -o updateCounts.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c updateDistanceUnit_omp.c -o updateDistanceUnit_omp.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c updateIndicesHMRFEM.c -o updateIndicesHMRFEM.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c updateIndices_omp.c -o updateIndices_omp.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c updateSmoothWeights.c -o updateSmoothWeights.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c updateY.c -o updateY.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c updateYBias.c -o updateYBias.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c yIndicesSummaries.c -o yIndicesSummaries.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c yIndicesSummariesBias.c -o yIndicesSummariesBias.o
/usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o mritc.so getDenSubBias_omp.o getDenSub_omp.o registerDynamicSymbol.o updateBiasInde_omp.o updateBiasWeights_omp.o updateCounts.o updateDistanceUnit_omp.o updateIndicesHMRFEM.o updateIndices_omp.o updateSmoothWeights.o updateY.o updateYBias.o yIndicesSummaries.o yIndicesSummariesBias.o -fopenmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/mritc/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/mritc/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/mritc/src'
installing to /data/gannet/ripley/R/packages/tests-clang/mritc.Rcheck/00LOCK-mritc/00new/mritc/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mritc)