* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/modelSSE.Rcheck’
* using R Under development (unstable) (2024-04-24 r86484)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 18.1.4
    flang-new version 18.1.4
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘modelSSE/DESCRIPTION’ ... OK
* this is package ‘modelSSE’ version ‘0.1-3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘modelSSE’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/modelSSE-00install.html' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [8s/10s] OK
* checking Rd files ... NOTE
checkRd: (-1) convert.epipara.to.delappara.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:40: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:41: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:42: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:43: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_nextgenclusterdistn.Rd:58: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_nextgenclusterdistn.Rd:59: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_nextgenclusterdistn.Rd:60: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_nextgenclusterdistn.Rd:61: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_nextgenclusterdistn.Rd:80: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_nextgenclusterdistn.Rd:81: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_nextgenclusterdistn.Rd:82: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_nextgenclusterdistn.Rd:83: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_offspringdistn.Rd:50: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:51: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:52: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:53: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:84: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:85: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:86: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:87: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_offspringdistn.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_offspringdistn.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_offspringdistn.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_outbreakdistn.Rd:59: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_outbreakdistn.Rd:60: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_outbreakdistn.Rd:61: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_outbreakdistn.Rd:62: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_outbreakdistn.Rd:86: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_outbreakdistn.Rd:87: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_outbreakdistn.Rd:88: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_outbreakdistn.Rd:89: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_reproductiondistn.Rd:26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_reproductiondistn.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_reproductiondistn.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_reproductiondistn.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mpox_19801984_DRC.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mpox_19801984_DRC.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mpox_19801984_DRC.Rd:30: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mpox_19801984_DRC.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mpox_19801984_DRC.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mpox_19801984_DRC.Rd:17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) overalllikelihood.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) overalllikelihood.Rd:26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) overalllikelihood.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) overalllikelihood.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.MCMC.Rd:31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.MCMC.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.MCMC.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.MCMC.Rd:34: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.MCMC.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) paraest.MCMC.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) paraest.MCMC.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) paraest.ML.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.ML.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.ML.Rd:30: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.ML.Rd:31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.ML.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) paraest.ML.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) paraest.ML.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) tailoffspringQ.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) tailoffspringQ.Rd:34: Lost braces in \itemize; meant \describe ?
checkRd: (-1) tailoffspringQ.Rd:35: Lost braces in \itemize; meant \describe ?
checkRd: (-1) tailoffspringQ.Rd:36: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... [8s/13s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE