* installing *source* package ‘jomo’ ...
** package ‘jomo’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/jomo/src'
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c jomo1C.c -o jomo1C.o
jomo1C.c:13:157: warning: variable 'indic' set but not used [-Wunused-but-set-variable]
13 | int i,j,k, IY,JY, IX, JX, Io, Jo, Ib, Jb, ns, nmiss=0,t, countm=0, counto=0, countmm=0, countmo=0, countoo=0, jj, tt, kk, ncon,ncat, pos,flag=0,nmaxx,h,fl, indic=0,currncat, MCMC, np;
| ^
1 warning generated.
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c jomo1ranC.c -o jomo1ranC.o
jomo1ranC.c:13:5: warning: variable 'indic' set but not used [-Wunused-but-set-variable]
13 | int indic=0,i,j,k, IY,JY, IX, JX, Io, Jo, Ib, Jb, ns, nmiss=0,t, countm=0, counto=0, countmm=0, countmo=0,countoo=0, jj, tt, kk, ncon,ncat, pos,flag=0,nmaxx,h;
| ^
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c jomo1ranhrC.c -o jomo1ranhrC.o
jomo1ranhrC.c:13:5: warning: variable 'indic' set but not used [-Wunused-but-set-variable]
13 | int indic=0,i,j,k, IY,JY, IX, JX, Io, Jo, Ib, Jb, ns, nmiss=0,t, countm=0, counto=0, countmm=0, countmo=0,countoo=0, jj, tt, kk, ncon,ncat, pos,flag=0,nmaxx,h;
| ^
1 warning generated.
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c jomo1ranhrsmcC.c -o jomo1ranhrsmcC.o
1 warning generated.
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c jomo1ransmcC.c -o jomo1ransmcC.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c jomo1smcC.c -o jomo1smcC.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c jomo2comC.c -o jomo2comC.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c jomo2hrC.c -o jomo2hrC.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c jomo2hrsmcC.c -o jomo2hrsmcC.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c jomo2smcC.c -o jomo2smcC.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c jomo_init.c -o jomo_init.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c pdflib.c -o pdflib.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wishart.c -o wishart.o
/usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o jomo.so jomo1C.o jomo1ranC.o jomo1ranhrC.o jomo1ranhrsmcC.o jomo1ransmcC.o jomo1smcC.o jomo2comC.o jomo2hrC.o jomo2hrsmcC.o jomo2smcC.o jomo_init.o pdflib.o wishart.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/jomo/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/jomo/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/jomo/src'
installing to /data/gannet/ripley/R/packages/tests-clang/jomo.Rcheck/00LOCK-jomo/00new/jomo/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (jomo)